Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01294 ATGGCAGCACAAAACTCCCAAACCCATTTCCAAGATTTTTTGCCTGTGATGGCCAACAAGCTTGGTGGGGATGGCCTAATTGATGAACTTTGCAATGGGTTCAATCTTTTGAAGGATTCAGAAAAAGGGGTCATCACCTTTGACAGCCTCAAGAGAAATTCTGCCCTTCTAGGCCTTCAGGGCCTCAGTGATGAGGATCTTCGCTCCATGCTTGAGGAAGGTGACTTTGATGGTGATGGGGCGCTCAATCAGTTGGAGTTCTGTGTTTTGATGTTCAGACTTAGTCCTGAACTCATGGAAGGTTCAAAGTTGTGGTTGGAGCAAGTCCTTCAACAAGAACTCAGAGATTACCTATAA 357 0.4538 MAAQNSQTHFQDFLPVMANKLGGDGLIDELCNGFNLLKDSEKGVITFDSLKRNSALLGLQGLSDEDLRSMLEEGDFDGDGALNQLEFCVLMFRLSPELMEGSKLWLEQVLQQELRDYL* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01294 118 ProSiteProfiles EF-hand calcium-binding domain profile. 62 97 IPR002048 GO:0005509
Phac5g01294 118 Pfam EF-hand domain pair 41 93 IPR002048 GO:0005509
Phac5g01294 118 ProSitePatterns EF-hand calcium-binding domain. 75 87 IPR018247 -
Phac5g01294 118 PANTHER CALCIUM-BINDING PROTEIN KIC 7 116 IPR044205 GO:0005509
Phac5g01294 118 SUPERFAMILY EF-hand 5 91 IPR011992 -
Phac5g01294 118 Gene3D - 7 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01294 Phac-Chr5 30282922 30284677 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g01294 4 114 EF-hand Containing Proteins AT4G27280 66.071 3.11e-50 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01294 K24345 - gmx:100500465 209.534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g01294 5 30282922 30284677 Phac5g01294 5 30282922 30284677 ECH