Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g01246 ATGGCCAACTTCCTCGCTCAGTTCCAGACAATAAAAAACACCTCCGATCGCCTCGTCATTTCAGTGGAGGATGTGAGTGACTTGTGGCCAACTGTCAAACCTGCTTTTGAGGGGCGTTTGCCGTTCAAACGGGCGACTTTGAATAACAAGACGCGGAACCCTGTCTTTGTTGACACATTGCCGGCCGAGTTTATATTAACTACTGATTCAAGACTACGCAGCCGGTTCCCTCAGGAGCAGTTTTTATTTTGGTTTCGAGAGCCTTACGCAACAGTTGTACTTGTCACCTGTGAGGATCTGGATGAGTTCAAAACCATCCTTAAACCACGTCTGAAATTAATTGTCCAAAATGACGAAAGGGAGTGGTTTGTTGTATTTGTATCAAAAGCTCACCCAGCTAACGATCAGGCAAACAAAATGGCAAAGAAAGTATATGCCAGACTTGAAGTGGAGTTTAATACCAAAAAAAGAGAAAGATGTTGCAAATATGATATACATTTCCCTGAAGCAAACTTTTGGGAGGATCTAGAATCAAAGATAATGGAATGCATCAGAAATACGCTGGATAGACGTGTACAATTTTATGAGGATGAAATACGAAAGCTCAGTGAACAGCGCCTCATGCCAGTCTGGAACTTCTGCAATTTTTTTATTCTGAAGGAAAGCTTGGCTTTTATGTTTGAAATGGCCCACCTTCATGATGATGCATTACGGGAATATGATGAGCTGGAACTCTGCTATCTTGAAACAGTTAACATGACTGGAAAGCAGAGAGATTTTGGAGGGGCTGATCATGGTGATGATCAGGCAGCATTGGTTAATACAAGAAATAAACCATTGACACAGATGGTTCAAGAGGATTCATTTAGGGAGTTTGAATTCAGACAGTATCTATTTGCATGTCAATCAAAGCTCTTATTCAAGCTAAATCGTCCCATTGAGGCTGCAACACGAGGCTATTCATTCATAATAAGCTTCTCTAAATCCTTGTCATTGCATGAGCGTATTCTGCCATTTTGTATGCGTGAAGTCTGGGTAGCAACTGCTTGCTTGTCTTTAATTGAAGCAACCACTTCAAATTATACTGATGGACATGTGGTGCCTGATATAGAGAAGGAGTACTTTCGTCTTCTGGGTGACCTATACTCTCTATCTAGACTTAAGTTCATGAGGCTTGCCTATTTAATTGGGTTTGGAACTGATATAGAAAGAAGCCCTGTCAACAGTGCTTCCCTCAGCTTGCTACCTTGGCCTAAGCCAGCTGTCTGGCCTTCACTTCCTGCTGACGCATCTGCAGAGGTGCTTGAGAAAGAAAAGCTTATTCTCCAAACAACTTCCAGAACCAAGCACTTTGGTATCCAAAGGAAACCCCTGCCCCTTGAACCTACTGTTCTTCTGCGAGAGGCCAACAGGCGTAGGGCTTCACTTTCAGCTGGAAATGCGTCTGAAATGTTTGACAATCGCCAGGGTCCATTTGATGGATCAGGTTTCGATGCATCTACAAGAATGTCACCACACAAAGCACCTGCAAATTCTATGTCACGTACAAATTCATCACCAGGAAACTTCGATAGTTCAATTGACCGACCAATGAGGCTTGCTGAGATTTTTATTGCTGCTGAGCATGCTTTGAAGCAAACCATTTCCAGTCCAGAACTGTTGAAATCGTTATCATCATCTGAGGAATTTGAGCAAAAATATTTAGAGCTAACTAAAGGTGCTGCTGACAATTACCATCGTTCCTGGTGGAAAAGACATGGTGTTGTCCTTGATGGTGAGATAGCAGCTGTTGCTTTTAAGCATGGGAATTTTGATCAGGCTGCAGAATCGTATGAGAAGGTTTGTGCACTGTATGCTGGTGAAGGATGGCAGGATTTGTTGGCTGAGGTCCTTCCCAATTTAGCTGAGTGTCAGAAGATGCTCAATGATCAAGCTGGCTACTTATTATCTTGTGTGAGGTTACTTTCTCTTGATGAAGGATTATTTTTGACCAAGGAGCGCCAAGCCTTTCAGTCAGAAGTCATTCGTCTTGCTCATAGTGAAATGAAGGACCCTGTACCTCTTGATGTATCATCATTAATAACATTTTCTGGAAATCCTGGGCCTCCTTTGGAGTTATGTGATAGGGATCCCGGTATTCTTTCTGTAACTGTATGGAGTGGGTTTCCAGATGATATAACTCTTGATTCAATCAGTCTTACATTAAATGCAACATATAATACTGATGAAGGTGTAAAGGCATTGAAGAGTTCTACAGCTATTGTGTTACACCCTGGTCGGAATACTATTACCTTAGATCTACCACCTCAGAAACCAGGATCTTATGTTCTTGGAGTTCTAACTGGACAGATTGGACAGTTAAGGTTTAGATCTCACAGTTTTTCAAAAGTTGGTCCTGCAGATAGTGATGATTTTATGAGTTATGAAAAGCCAGCTAAACCCATTTTGAAGGTTTTCAAACCTAGAGCTCTTGTTGATCTTGATGCTGCTGTTTCATCTGCTTTGTTGATAAATGAACACCAATGGGTTGGCATTTTAGTTCGACCAGTAAAATACTCCCTCAAAGCTGCTGTCTTGCATATCGATACTGGCCCAGGGTTGGAGATTAAAGAGTCACATGTAATTGAGATGGAAAGCTATGCTGGTGTATCACAGAATAAAGATGACCAGCTGCAGAATGACAGTGCTCAAATAAATTCTGATAAAAATTTTGAACGTTTAACTCTTAATGATGGTAAAATAGAATTTCCGAATTGGGCAAGTGACAATCCTTCTATTCTTTGGGTTCTGGTTCGTGCCATCAGTGACACACTCAGCACAGGATCTTCTTCAGCCACAACAAGGAGAGAGAGTATTGTAGATGGAATGAGAACAATAGCTCTGAAACTTGAATTTGGAGCATTCCACAATCAGATATTTGAAAGGACCCTAGCAGTGCATTTTACATATCCTTTCTATGTGAGGACACGAGTTACTGATAAATGCAATGATGGCACCCTGCTTCTGCAGGTAATACTTCACTCTGAAGTAAAGGCTACACTGACCGTATATGATGCTTGGCTTGATCTTCAAGATGGATTTGTTCATACTGGACAAACTGAGGGTAGAGCTAATTCAAGTTTCTTCCCGCTAGTCATATCTCCCACTTCCAAAGCAGGAATTTTGTTTAGTATCTGCCTAGACAAGACAAATGCAGAAGAAGCCAGCAAGAAACCAGAAAGCATATTAAATATCAAATACGGAATTTCTGGTAATAGAACAATTGGGGCCCACCCTCCTGTCATGAATGAATCTACTGGAGTTGATGATGCCAGACAAGAGTTAATCTTCAGGAGTGCAATTACTTTGCAAAGGCCTGTGCTTGATCCTTGCCTAGCTGTTGGTTTTCTTCCTCTCCCTTCAAATGGCCTGAGAGTTGGACAACTAATTAAGATGCAATGGAGAGTGGAAAGGTTAAAGGATTTGGATGAGGAAGGAGTTTCTAAACCGGATGATGAGGTGCTATATGAGGTAAACGCAAATTCTGGAAATTGGATGATAGCCGGGAGGAAAAGGGGATACGCATCTCTGTCCTCAAAACAAGGCGCAAGAATTATTATCTCAGTATTATGCATGCCACTGGTGGCTGGTTATGTTCGTCCTCCCCTACTAGGGTTGCCAGATGTTGATGAGGCAAATATAAGCTGCAAGCCTGCTGGACCACATCTGGTTTGTGTTTTGCCACCGCCTCTCAGTTCTTCATTCTGCATTCAAGTTAATTCATGA 3765 0.4186 MANFLAQFQTIKNTSDRLVISVEDVSDLWPTVKPAFEGRLPFKRATLNNKTRNPVFVDTLPAEFILTTDSRLRSRFPQEQFLFWFREPYATVVLVTCEDLDEFKTILKPRLKLIVQNDEREWFVVFVSKAHPANDQANKMAKKVYARLEVEFNTKKRERCCKYDIHFPEANFWEDLESKIMECIRNTLDRRVQFYEDEIRKLSEQRLMPVWNFCNFFILKESLAFMFEMAHLHDDALREYDELELCYLETVNMTGKQRDFGGADHGDDQAALVNTRNKPLTQMVQEDSFREFEFRQYLFACQSKLLFKLNRPIEAATRGYSFIISFSKSLSLHERILPFCMREVWVATACLSLIEATTSNYTDGHVVPDIEKEYFRLLGDLYSLSRLKFMRLAYLIGFGTDIERSPVNSASLSLLPWPKPAVWPSLPADASAEVLEKEKLILQTTSRTKHFGIQRKPLPLEPTVLLREANRRRASLSAGNASEMFDNRQGPFDGSGFDASTRMSPHKAPANSMSRTNSSPGNFDSSIDRPMRLAEIFIAAEHALKQTISSPELLKSLSSSEEFEQKYLELTKGAADNYHRSWWKRHGVVLDGEIAAVAFKHGNFDQAAESYEKVCALYAGEGWQDLLAEVLPNLAECQKMLNDQAGYLLSCVRLLSLDEGLFLTKERQAFQSEVIRLAHSEMKDPVPLDVSSLITFSGNPGPPLELCDRDPGILSVTVWSGFPDDITLDSISLTLNATYNTDEGVKALKSSTAIVLHPGRNTITLDLPPQKPGSYVLGVLTGQIGQLRFRSHSFSKVGPADSDDFMSYEKPAKPILKVFKPRALVDLDAAVSSALLINEHQWVGILVRPVKYSLKAAVLHIDTGPGLEIKESHVIEMESYAGVSQNKDDQLQNDSAQINSDKNFERLTLNDGKIEFPNWASDNPSILWVLVRAISDTLSTGSSSATTRRESIVDGMRTIALKLEFGAFHNQIFERTLAVHFTYPFYVRTRVTDKCNDGTLLLQVILHSEVKATLTVYDAWLDLQDGFVHTGQTEGRANSSFFPLVISPTSKAGILFSICLDKTNAEEASKKPESILNIKYGISGNRTIGAHPPVMNESTGVDDARQELIFRSAITLQRPVLDPCLAVGFLPLPSNGLRVGQLIKMQWRVERLKDLDEEGVSKPDDEVLYEVNANSGNWMIAGRKRGYASLSSKQGARIIISVLCMPLVAGYVRPPLLGLPDVDEANISCKPAGPHLVCVLPPPLSSSFCIQVNS* 1255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g01246 1254 MobiDBLite consensus disorder prediction 505 524 - -
Phac5g01246 1254 MobiDBLite consensus disorder prediction 477 524 - -
Phac5g01246 1254 Pfam Trafficking protein particle complex subunit 10, TRAPPC10 1135 1213 IPR022233 -
Phac5g01246 1254 PANTHER EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1 8 1250 IPR045126 GO:0048193|GO:1990071
Phac5g01246 1254 Coils Coil 185 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g01246 Phac-Chr5 28760414 28779191 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g01246 K20307 - gmx:100787264 2348.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g01246 5 28760414 28779191 Phac5g01246 5 28760414 28779191 ECH