Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac5g00925 ATGTCGCATACCTCCGGCGTGGATGCCTTCGCCGATCGCTTCCGCCACTCGCTCAGCTGCAACAACGACACCGGCAACATTAACAAGCCCGACTTCCGAGAACTCGATCTGGGCTCCCCGGTGTCACCATTGCGTACCACGCGCGCCCCGGCCGCGAGTACCAGCTCGAGCTCATCTGGGTCCTTCTCGGGTCGAACCGGGCCCAACCAGGTTCCCCGAAAGCCCGAATCTTCGCACACCAATAGTAACACTAACAACAGCAGTAGTAGCAACAACAACAACTCCGGCGAGCTTTCTGGTTCGAGCGAGAACAGCCCCACCGCCCGTGGTTTCAAACCGGGTCATACGAGATCCGACTCTGGATCCGCGCCGGGGCCGCTGCTATACTCCGGCCAGACTGCTACTTCGCCGGCGATGAATGTTCTCCCCACCGGGAACATCTGCCCCTCCGGGAAGATCTTGAAGGCGGGGATGGGGATGGTGGCGAATCGGAGTAGTAGAAGCGATGTTTTGGGGTCCGGCATGGGGAACTACGGCCACGGGAGCATAATGCGCGGCGGCGGAAAGGCGGAGCCGGTGAGCTCACGCGGCGGTGGCGGCAATGAGGCAGTAAAGAGAGGTGGGCACGTGCAGAGTGTGGATCCAGAGGAATTGAAGAGATTGGGGAATGAGTGTTATAAAAGAGGGAACTTTGCTGATGCGTTAAGTCTTTATGATCGCGCGATTGCGATGTCGCCGGCGAGTGTCGCTTACCGGAGCAACCGCGCGGCGGCGCTGACCGGGCTGGGACGTTTTGGTGAGGCTGTGAGGGAATGTGAGGAGGCTGTGAGGTTGGATCCTAATTATGGAAGGGCTCATCAGCGTTTAGCTTCTCTTTTCCTCAGGTTAGGACAAGTTGAGAATGCTAGGAAGCACCTTTGCCACCATGGGATGCAGCCAGATCCATCGGAGATGCAGAGGTTGCAAGTGGTGGAAAAGCATATCAGCAAATGTGGGGATGTAAGGAGGATAGGGGATTGGAAGAGTGTTCTCAGGGAGGTTGATGCTGCCATTGCTGCCGGAGCGGATTCTTCTCCTCAGCTCTTTATGTGTAGAGCAGAAGCGTTTTTGAAGCTCCACCAGATTGATGATGCAGAAACAGTTTTGTTCCATATACCAAAATCAGAGTTGCACACTAATTCCACTTCTCAGGCAAGATTTTTTGGGATGGTTTCTGAGGCCTATTTCTATTTTGTGAGAGCACAGATTGAGATGGCATTGGGAAGGTTCGAGAATGCCGTTACAGCTGCTGAGAAAGCCAGTCAGATTGATCCCCGGAGTGTTGAAGTTGCTGTTTTGCTCAACAATGTGAGGATGGTGGCTAGGGCTCGAGTGCGTGGCAATGATCTCTTTAAATCTGAAAGGTACACCGAAGCTTGCTCGGCTTATGGGGAAGGTTTGAGACTGGACCCTTCCAATTCTGTACTATATTGCAACAGAGCAGCTTGTTGGTTTAAGCTTGGGCAGTGGGAAAGATCAATTGAAGACTCCAACCAAGCTTTACATATCCAACCAAATTACACCAAGGCCCTTCTTCGGAGGGCTGCATCAAACAGCAAGCTAGAACGGTGGGAGGAAGCCGTCAAAGATTATGAGATCTTGCGGAGAGAACTTCCAAATGATAACGAAGTTGCTGAATCTCTTTTCCATGCACAAGTTGCCCTAAAGAAATCACGTGGGGAAGAAGTATATAATTTAAAATTTGGCGGCGAAGTGGAAGAAGTATCAGGTCTGGAGCAGTTTAGAGCTGCAATATGTTTACCAGGTGTATCTGTTGTCCATTTTGAAGTTGGATCTAACTCACAATGCAAACAAATATCACCATTTGTGGATACACTATGCGGTCGATATCCATCTATTAACTTCCTCAAGGTGGACATTCAAGAAAGCCCAACAGTTGGTACTGCGGAGAACGTTAGAATTGTACCAACCTTCAAGATATACAAAAATGGCAGCCGAGTGAAGGAAATTGTTTGCCCCAGTCGTGAGATGTTGGAACACTCTGTGAGGCATTACAGCTTTTAG 2064 0.5102 MSHTSGVDAFADRFRHSLSCNNDTGNINKPDFRELDLGSPVSPLRTTRAPAASTSSSSSGSFSGRTGPNQVPRKPESSHTNSNTNNSSSSNNNNSGELSGSSENSPTARGFKPGHTRSDSGSAPGPLLYSGQTATSPAMNVLPTGNICPSGKILKAGMGMVANRSSRSDVLGSGMGNYGHGSIMRGGGKAEPVSSRGGGGNEAVKRGGHVQSVDPEELKRLGNECYKRGNFADALSLYDRAIAMSPASVAYRSNRAAALTGLGRFGEAVRECEEAVRLDPNYGRAHQRLASLFLRLGQVENARKHLCHHGMQPDPSEMQRLQVVEKHISKCGDVRRIGDWKSVLREVDAAIAAGADSSPQLFMCRAEAFLKLHQIDDAETVLFHIPKSELHTNSTSQARFFGMVSEAYFYFVRAQIEMALGRFENAVTAAEKASQIDPRSVEVAVLLNNVRMVARARVRGNDLFKSERYTEACSAYGEGLRLDPSNSVLYCNRAACWFKLGQWERSIEDSNQALHIQPNYTKALLRRAASNSKLERWEEAVKDYEILRRELPNDNEVAESLFHAQVALKKSRGEEVYNLKFGGEVEEVSGLEQFRAAICLPGVSVVHFEVGSNSQCKQISPFVDTLCGRYPSINFLKVDIQESPTVGTAENVRIVPTFKIYKNGSRVKEIVCPSREMLEHSVRHYSF* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac5g00925 687 CDD TRX_family 592 676 - -
Phac5g00925 687 SUPERFAMILY TPR-like 215 442 IPR011990 GO:0005515
Phac5g00925 687 MobiDBLite consensus disorder prediction 17 132 - -
Phac5g00925 687 ProSiteProfiles TPR repeat profile. 487 520 IPR019734 GO:0005515
Phac5g00925 687 Gene3D Glutaredoxin 580 686 - -
Phac5g00925 687 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 23 684 IPR044534 -
Phac5g00925 687 SUPERFAMILY Thioredoxin-like 517 676 IPR036249 -
Phac5g00925 687 Pfam Tetratricopeptide repeat 221 281 - -
Phac5g00925 687 ProSiteProfiles TPR repeat profile. 407 440 IPR019734 GO:0005515
Phac5g00925 687 ProSiteProfiles TPR repeat profile. 215 248 IPR019734 GO:0005515
Phac5g00925 687 Pfam Tetratricopeptide repeat 409 438 IPR019734 GO:0005515
Phac5g00925 687 SUPERFAMILY TPR-like 458 570 IPR011990 GO:0005515
Phac5g00925 687 Gene3D Tetratricopeptide repeat domain 213 573 IPR011990 GO:0005515
Phac5g00925 687 SMART tpr_5 407 440 IPR019734 GO:0005515
Phac5g00925 687 SMART tpr_5 249 282 IPR019734 GO:0005515
Phac5g00925 687 SMART tpr_5 487 520 IPR019734 GO:0005515
Phac5g00925 687 SMART tpr_5 521 554 IPR019734 GO:0005515
Phac5g00925 687 SMART tpr_5 215 248 IPR019734 GO:0005515
Phac5g00925 687 SMART tpr_5 453 486 IPR019734 GO:0005515
Phac5g00925 687 MobiDBLite consensus disorder prediction 182 214 - -
Phac5g00925 687 Pfam Thioredoxin 602 677 IPR013766 -
Phac5g00925 687 FunFam TPR repeat-containing thioredoxin TTL4 579 686 - -
Phac5g00925 687 MobiDBLite consensus disorder prediction 46 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac5g00925 Phac-Chr5 10372662 10377454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac5g00925 229 551 Glycosyltransferase AT3G04240 21.713 2.23e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac5g00925 - - gmx:100795358 1148.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac5g00925 5 10372662 10377454 Phac5g00925 5 10372662 10377454 ECH