Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02126 ATGGCACATTTCTTTCTTTCACTTTGCATCTTCTTCTTCACAATCCTATCCCTCACCTCCTCTTTCACCATCACCACTCCTTCACACACCACCATTCTCAACATCTCCTCTTCCCTTCACCAAGCCCGCCAAATCCTCTCCTTCAAACCCCAACAAGCTCTTGAACAAACTTTAACTCAAAAGCAAACCCCCACTTCACATTCTTCCCCTTTCTTCTCCCTTCAACTCCACACAAGGGAAACCCTCTTCAATGCGCAACACCCAGATTACAAAACCCTAGTTTTGTCCCGACTCGCTCGCGACTCAGCCCGGGTCAACTCGCTCGAGACTAAGCTTCAATGCCTCTACCAAGTTGCCTACGGTGACGGTTCGTTCACGGTTGGGGAGTACGTCACCGAAACGGTGTCGTTCGGCGGGTCTGGATCAGTTAATCGGGTCGCGATGGGGTGCGGGCACGATAATGAGGGGCTATTCATTGGGGCCGCGGGGCTTCTTGGGCTTGGTGGTGGGCCCTTGTCGTTAACCTCCCAAATCAAAGCGGCGTCGTTTTCGTATTGTTTGGTGGACCGCGACTCGGGGAAATCGTCCACGCTCGAGTTCAACTCACCTCGACCAGGTGACTCGGTGACCGCGCCGTTGCTGAAGAACCAGAAGGTGAACACGTTCTACTACGTGGAGCTCACAGGATTTAGCGTCGGCGGAGACATTGTCTCCATCCCGCCGGAGACTTTCGCCGTCGACCAGTCCGGCGTCGGCGGTGTGATCGTCGACTCCGGCACCGCGATAACTCGGCTGCGGACTCAGGCCTACAACTCGGTGCGCGACGCGTTCAAGAGGATGACTCAGAACCTGCGTCCCGCGGAGGGCGTTGCGCTGTTCGACACGTGCTACGACCTGTCGTCTCTGCAATCGGTGCGCGTTCCGACGGTGTCGTTTCACTTCGCCGGCGATAAGACGTGGTCGCTTCCGGCGAAGAATTATCTGATTCCGGTGGACAGCGCCGGAACTTACTGTTTCGCGTTTGCGCCAACGGCGTCGTCTTTGTCGATCATAGGAAACGTGCAGCAACAGGGGACACGTGTCAGCTTCGATCTAGCGAACTCTGTGGTGGGATTCTCTCCCAACAAGTGCTAG 1134 0.5573 MAHFFLSLCIFFFTILSLTSSFTITTPSHTTILNISSSLHQARQILSFKPQQALEQTLTQKQTPTSHSSPFFSLQLHTRETLFNAQHPDYKTLVLSRLARDSARVNSLETKLQCLYQVAYGDGSFTVGEYVTETVSFGGSGSVNRVAMGCGHDNEGLFIGAAGLLGLGGGPLSLTSQIKAASFSYCLVDRDSGKSSTLEFNSPRPGDSVTAPLLKNQKVNTFYYVELTGFSVGGDIVSIPPETFAVDQSGVGGVIVDSGTAITRLRTQAYNSVRDAFKRMTQNLRPAEGVALFDTCYDLSSLQSVRVPTVSFHFAGDKTWSLPAKNYLIPVDSAGTYCFAFAPTASSLSIIGNVQQQGTRVSFDLANSVVGFSPNKC* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02126 377 SUPERFAMILY Acid proteases 110 377 IPR021109 -
Phac4g02126 377 FunFam Aspartyl protease family protein 2 201 377 - -
Phac4g02126 377 Gene3D Acid Proteases 204 377 IPR021109 -
Phac4g02126 377 Pfam Xylanase inhibitor N-terminal 71 200 IPR032861 -
Phac4g02126 377 PANTHER ASPARTYL PROTEASES 113 371 IPR001461 GO:0004190|GO:0006508
Phac4g02126 377 Pfam Xylanase inhibitor C-terminal 223 373 IPR032799 -
Phac4g02126 377 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 254 265 IPR001969 GO:0004190|GO:0006508
Phac4g02126 377 Gene3D Acid Proteases 18 200 IPR021109 -
Phac4g02126 377 ProSiteProfiles Peptidase family A1 domain profile. 18 373 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02126 Phac-Chr4 47516457 47517920 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02126 113 377 Miscellaneous Gene Families AT1G77480 25.581 1.52e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02126 K22683 - gmx:100784849 479.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac4g02126 4 47516457 47517920 Phac4g02126 4 47516457 47517920 ECH