Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02093 ATGAACACTGCAACCGGCGCAAACATGGTTCGGCGCAAGCGTCGGAGGCATTCACCGGAAAATTCTCTGTCAAAACGACGACGGCGTTCTCAGTTTGAATGTCGGAGTAGGAGATGGGTTGTCTCTTCCAAAGACTCTTCCAATTGCACGGATAAGATTGTGGTTGTTTCATACAATATACTTGGTGTTGAAAATGCATCAAATCATCTGGATTTGTATTCTAATATTCCACATAGGTTGTTGAGGTGGGACAGGAGGAAAAGGCTCATACTTGAAGAGATTAATAACTATAACGCCAGCATACTGTGTTTCCAGGAGGTTGATCATTTTAATGATCTAGACAATCTTTTCCAGAACAGTGGCTTTAAAGGTATTTACAAGGCTCGCACTGGGGAAGCACAAGATGGATGTGCTGTATTTTGGAAAGACAAGTTATTCAATCTTTTGCATCAAGAAGATATAGAGTTCCAAAGATTTGGCATGCGTAACAATGTTGCCCAGCTGTGTATTTTGGAGGCAAACCATGATAAAAAAGAATCTGACGCATGTAACCTAACCACAATGGAACCATCCACAGGAAAAAGAAGATTTGTTGTAGGAAACATACATGTGCTGTTCAACCCAAATCGTGGTGACATTAAACTGGGCCAGGTCAGAATTTTACTTGATAAAGCTTACAAGTTGTCACAAGAATGGGGCAACATCCCTGTTATTATTGCTGGGGATTTAAATAGTGTTCCACAGAGTGCCATATATAAGTTTCTGTCTTCGTCAAAGCTAGACATACAATTACATGATCGCCGAAATATGTCAGGACAGCTTGAAATCCAGTCCAACAGACTCTTCAGATCACAGATTCCTGATGATGCCAGCATTTCGATGACTCTTTCAAGGCAATTGTTATATAGATGGAGTGTGGAAGAACTAAGACTTGCAACAGGGGCGAAAGGAATCACTCATCTTCAGCACCAGCTCAAACTCCGTAGTGCCTATAGTGGTGTTCCTGGAGACCATAAAACAAGAGATGATATTGGGGAGCCCTTGGCAACATCATACCACTCCAAGTTCATGGGAACTGTTGATTATATCTGGCATTCTGATGATCTTGTTCCACTTAGAGTTCTTGAAACCTTGCCAATTGATATTCTTAGAAGATCTGGAGGACTCCCTAGTGAGAAATGGGGAAGTGATCACCTAGCTGTTGTATGTGAGTTGGCTTTTAGCAAACAACAACAATGTATGAGGTCTGAACCTTAA 1257 0.4145 MNTATGANMVRRKRRRHSPENSLSKRRRRSQFECRSRRWVVSSKDSSNCTDKIVVVSYNILGVENASNHLDLYSNIPHRLLRWDRRKRLILEEINNYNASILCFQEVDHFNDLDNLFQNSGFKGIYKARTGEAQDGCAVFWKDKLFNLLHQEDIEFQRFGMRNNVAQLCILEANHDKKESDACNLTTMEPSTGKRRFVVGNIHVLFNPNRGDIKLGQVRILLDKAYKLSQEWGNIPVIIAGDLNSVPQSAIYKFLSSSKLDIQLHDRRNMSGQLEIQSNRLFRSQIPDDASISMTLSRQLLYRWSVEELRLATGAKGITHLQHQLKLRSAYSGVPGDHKTRDDIGEPLATSYHSKFMGTVDYIWHSDDLVPLRVLETLPIDILRRSGGLPSEKWGSDHLAVVCELAFSKQQQCMRSEP* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02093 418 MobiDBLite consensus disorder prediction 1 29 - -
Phac4g02093 418 Gene3D Endonuclease/exonuclease/phosphatase 25 417 IPR036691 -
Phac4g02093 418 Pfam Endonuclease/Exonuclease/phosphatase family 57 398 IPR005135 GO:0003824
Phac4g02093 418 MobiDBLite consensus disorder prediction 9 23 - -
Phac4g02093 418 SUPERFAMILY DNase I-like 52 406 IPR036691 -
Phac4g02093 418 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 8 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02093 Phac-Chr4 47286642 47293549 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02093 83 257 EF-hand Containing Proteins AT5G54130 26.087 3.06e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02093 - - vra:106769764 738.413
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac4g02093 4 47286642 47293549 Phac4g02093 4 47286642 47293549 ECH