Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02082 ATGGCGTTTCCCAACACTTGTAAACTCTCAGAATTTTCTTTTTCATCACTCAACCCTCCTCCTCCTTCTCGCTCTTTCCACAAATTCCTATTTCGCACACTCACCTTTGCTTCTCTCCCAACCCCTAAACCTAACGCCTCTGCACCATGGCTTACCAAATCCCCCTCTCCCAAAAGGGTCACCGAACCCCTCACTGTCGACGACCCAATTCACCGCACAACCCCAAAACAACCGCAGAACGCCGTCGAGAGAATCGTCCTTCGGTTACGCAACTTGGGTCTGCTTGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAGGACAAAAGGAAGAATTTCCGGCAAGTAATCCGGCGCCGGTGACCGGAGATGAGAGGCTAAGCGAGTTGCTCCGGCGGGACTGGGGAAGACCGGACGCCGGGCTGGTGGGCGAGGATGAGGAGGAGGAGATGATGCTGCCGTGGGAGAGGGAGAAGGAGAAGGTTGTGGTGGTTAGGAGTGGAAGGGATGAAGAAGGGTTGAAGACGAGGAGGCTTACGGCTCCTAGTTTGGCTGATTTGACCCTTGAGGATGAGTTGCTGAGGAGGTTGAGGAGAGAGGGGATGCGTGTGAGGGAGAGGGTGAGTGTCCCCAAGGCTGGACTCACTGAGGAGGTGATGGAGAAGATTCATAAGAGGTGGATGAAGGAGGAATTGGTGAGACTCAAGTTTCATGAGGAACTTGCAAAGGATATGAGGAAGGCTCATGAGATTGTTGAGCGTCGAACTGGCGGATTGGTCACATGGAGGTCAGGGAGTGTTATGATGGTGTATCGTGGTATTGATTACCAAGGGCCTGACTCAAGGAAGGAAGTTAATGACAAGAAAGGTAATGACTTTTTTGTGCCTGATGTCTCATCAGGAAGTTTGTTGAAAAGTGAAGTCAGTAATGCAGCCACATCTCGGGAAAAAAGTGAGGTGGTTGTGAGGGAGCAAGAACAGTCTAAGAATGTCACTGAGGCAGAAACAGAGTACAATGCACTTCTTGATGAGTTAGGTCCCCGTTTTGTTGGATGGTGGGGTACGGGGATACTCCCTGTTGATGCTGATTTACTTCCAAAAACAGTTCCAGGTTACAAAACACCGTTTAGGCTTCTTCCTACAGGAATGCGTTCTCGGCTGACAAATGCAGAGATGACCAATTTAAGGAAACTTGCAAAATCAATTCCTTGTCATTTTGCCTTAGGGAGAAATAGAAATCACCAAGGTCTAGCATGTGCTATTCTTAAGCTTTGGGAGAAAAGTTTAGTTGCAAAGATTGCTGTCAAACCTGGCATCCAAAACACAAACAATGAACTGATGTCTGAGGAGCTGAAGATGTTAACAGGAGGTACCTTGCTGCTTAGGAATAAATATTTCATTGTTATATACCGTGGGAAAGACTTCGTTCCAATAAATGTCGCTGCTGTTTTAGCTGAAAGAGAGGAAATGACAAAGCAAGTGCAGGATGTTGAAGACAAGTTCCGGTACAGAGCAGTGAATGCAATTCCATCAGGGCAAGGTGAAGCAACAGCACAGGCTGGGACTTTAGCAGAGTTCTATGAGGCCCAGGCTCGATGGGGCAGGGAAATATCTCCTGAAGAACGTGAGAAGATGGTGGAAGAAGCTGCCAAAGCCAAGACTGCTAAGCTTGTCAGAAAAATTGAACATAAACTATTTATAGCCCAGACCAAAAAGCATAGAGCAGAAAAGCTCTTAGCTAAAATAGAATCATCGATGGTTCCAGCTGGTCCTGATTATGACCAGGAAACAATCACAGATGAAGAACGTGTTATGTTCCGTAAAGTTGGTTTAAGAATGAAACCATACTTACCACTTGGTATACGTGGTGTTTTTGATGGTGTCGTTGAGAATATGCATTTGCATTGGAAACACCGAGAACTTGTAAAATTGATGACAAAACAAAAGACTCTTGCTTTTGTGGAAGACACAGCAAGGTTGCTTGAATATGAGAGTGGTGGAATACTGGTTGCAATAGAAAAAGTTTCCAAAGAATTTGCTCTTATTTACTATCGTGGAAAGAATTATAAGCGGCCAATTAATCTGAGGCCAAGAAACCTTTTAACGAAGGGAAAGGCATTAAAGCGACATGTAGCCATGCAACGTCACGAGGCTCTGAGTCAGCATATTACTGAACTGGAAAAGACTATAGAAGAATTGAAAAAAGAACTTGATAAGCCTCAAGATTTGAATGATGAAGATGGGTCGAGCTCAGAGGAAGAGGATCATAACCAAATAGACAACATCTCAGAATTGACCCTTAGTGAGAATGAAGATTCTGATGATTTTGATGATGAGGACAAAAGCGACTGGTTAGAGGATGAGGAAGAAAGTGATTGGGAAGATGATGAAGACCTGAGTTTTCAAAAGTCGTAA 2409 0.45 MAFPNTCKLSEFSFSSLNPPPPSRSFHKFLFRTLTFASLPTPKPNASAPWLTKSPSPKRVTEPLTVDDPIHRTTPKQPQNAVERIVLRLRNLGLLEEEEEEEEEAGQKEEFPASNPAPVTGDERLSELLRRDWGRPDAGLVGEDEEEEMMLPWEREKEKVVVVRSGRDEEGLKTRRLTAPSLADLTLEDELLRRLRREGMRVRERVSVPKAGLTEEVMEKIHKRWMKEELVRLKFHEELAKDMRKAHEIVERRTGGLVTWRSGSVMMVYRGIDYQGPDSRKEVNDKKGNDFFVPDVSSGSLLKSEVSNAATSREKSEVVVREQEQSKNVTEAETEYNALLDELGPRFVGWWGTGILPVDADLLPKTVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLAKSIPCHFALGRNRNHQGLACAILKLWEKSLVAKIAVKPGIQNTNNELMSEELKMLTGGTLLLRNKYFIVIYRGKDFVPINVAAVLAEREEMTKQVQDVEDKFRYRAVNAIPSGQGEATAQAGTLAEFYEAQARWGREISPEEREKMVEEAAKAKTAKLVRKIEHKLFIAQTKKHRAEKLLAKIESSMVPAGPDYDQETITDEERVMFRKVGLRMKPYLPLGIRGVFDGVVENMHLHWKHRELVKLMTKQKTLAFVEDTARLLEYESGGILVAIEKVSKEFALIYYRGKNYKRPINLRPRNLLTKGKALKRHVAMQRHEALSQHITELEKTIEELKKELDKPQDLNDEDGSSSEEEDHNQIDNISELTLSENEDSDDFDDEDKSDWLEDEEESDWEDDEDLSFQKS* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02082 802 SUPERFAMILY YhbY-like 595 693 IPR035920 -
Phac4g02082 802 FunFam CRM-domain containing factor CFM3B, chloroplastic 595 697 - -
Phac4g02082 802 Coils Coil 322 342 - -
Phac4g02082 802 MobiDBLite consensus disorder prediction 43 78 - -
Phac4g02082 802 SMART CRS1_YhbY_2 187 270 IPR001890 GO:0003723
Phac4g02082 802 SMART CRS1_YhbY_2 385 469 IPR001890 GO:0003723
Phac4g02082 802 SMART CRS1_YhbY_2 596 683 IPR001890 GO:0003723
Phac4g02082 802 ProSiteProfiles CRM domain profile. 383 480 IPR001890 GO:0003723
Phac4g02082 802 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 40 781 IPR045278 GO:0000375|GO:0003729
Phac4g02082 802 Gene3D - 384 479 IPR035920 -
Phac4g02082 802 Gene3D - 185 286 IPR035920 -
Phac4g02082 802 MobiDBLite consensus disorder prediction 734 802 - -
Phac4g02082 802 ProSiteProfiles CRM domain profile. 185 281 IPR001890 GO:0003723
Phac4g02082 802 Coils Coil 478 498 - -
Phac4g02082 802 MobiDBLite consensus disorder prediction 96 121 - -
Phac4g02082 802 FunFam CRS2-associated factor 1, chloroplastic 186 281 - -
Phac4g02082 802 Gene3D - 596 700 IPR035920 -
Phac4g02082 802 Coils Coil 714 741 - -
Phac4g02082 802 ProSiteProfiles CRM domain profile. 594 694 IPR001890 GO:0003723
Phac4g02082 802 Pfam CRS1 / YhbY (CRM) domain 597 672 IPR001890 GO:0003723
Phac4g02082 802 Pfam CRS1 / YhbY (CRM) domain 188 270 IPR001890 GO:0003723
Phac4g02082 802 Pfam CRS1 / YhbY (CRM) domain 385 469 IPR001890 GO:0003723
Phac4g02082 802 MobiDBLite consensus disorder prediction 765 795 - -
Phac4g02082 802 FunFam CRS2-associated factor 1, chloroplastic 384 479 - -
Phac4g02082 802 SUPERFAMILY YhbY-like 385 476 IPR035920 -
Phac4g02082 802 SUPERFAMILY YhbY-like 186 276 IPR035920 -
Phac4g02082 802 Coils Coil 233 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02082 Phac-Chr4 47204816 47211200 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02082 - - gmx:100788177 1194.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac4g02082 4 47204816 47211200 Phac4g02082 4 47204816 47211200 ECH