Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g02080 ATGAGCTTGAAGAAAAGGGTCCTTTCAATTAACATTGAAGAGGCTGCTGTGGACTTTTTCAACCATCTCTTGCAGGAGAAGCCCAGAATTCCGGTCTTTATTCCTCTGATTCTGATTGCTTGGGCTGTTGAGAGATGGCTCTTCTCTGCCTCCTCTTGGGTTCCTCTTGCTCTTGCTGTGTGGACTACTATACAGTATGGGAGATACCAACGCAAACTACTCGTGGAGGACTTGGATAAGAAATGGAAGAGGATCATACTGAATGTCTCGCCCATCACACCATTGGAGCATTGTGAGTGGTTGAACAAGTTGTTGACAGAAGTCTGGTCCAACTATTTTAATGCCAAGTTTTCAATAAGGCTATCTGCTATTGTTGAGAAACGTATAAAGCTCCGGAAACCAAGACTTCTGGAACGAGTTGAGTTGCAGGAGTTTTCGCTAGGATCATGCCCTCCTAGCTTGGCTCTGAGAGGGATGCGTTGGTCAACTATTGGTGATCAGCGATTTCTGCAACTGGGTTTTGACTGGGATACAAGTGAAATGAGCATTTTATTGCTTGCTAAGCTTGCAAAGCCGTTGATTGGAACTGCTCGAATTGTGATTAACAGTCTTCATATCAAGGGTGATCTTCTTGCTACACCAATTCTAGATGGAAAAGCACTTCTATACTCATTCGTATCAACTCCTGAGGTGAGAATAGGAGTTGCCTTTGGAAGCGGTGGGAGCCAATCACTTCCTGCCACTGAATGGCCTGTTGTTTCTTCTTGGCTGGAAAAACTTTTTGCTGACACCCTGGCAAAAACCATGGTGGAACCCCGGCGACGTTGTTTCACTTTGCCTGCTGTTGATTTAAGGAAAAAAGCAGTTGGAGGCATTATATATATTAGAGTGATTTCAGCGAATAAACTTTCTGGGAGTTGCTTTAAGACATCTAGGAGGCAATCAAATGGGGCAACCAATGGTTATACAGAGGACAATTTTGATGACAAGGATCTGGAGACATTTGTAGAAGTAGAAGTTGAGGAATTAACCAGGAGAACAGATGTCAGAATGGGTTCAACCCCCAGATGGGATGCACCATTTAATATGGTTTTACATGATAATACAGGAACTCTTCGTTTCAATCTTTATCAGAGCCATCCCAACAATGTGAGGTGTGACTATCTAGCAAGTTGTGAAATCAAGTTGAGGCATGTTGAAGATGATTCAACAATAATGTGGGCCGTAGGACCTGATTCTGGAGTCATTGCAAAGCAGGCACAGTTCTGTGGTGAAGAAATTGAAATGGTTGTCCCATTTGAGGGCCCTAACTCTGCAGAGTTGAAGGTGAGCATTGTAGTCAAAGAGTGGCAATTTTCTGATGGTTCGCATAGCTTGAACAGTATCCGGAGTACCAACTCTCAGCAGTCAATTAATGGATCACCAAATATTCAGTTAAAAACTGGAAGGAAAATTAGTGTAATTGTTGTGGAAGGAAAGGATCTTGCTGCAAGAGATAAATCTGGAAAATTTGACCCTTATATCAAATTGCAGTATGGAAAGGTTGTCCAGAAATCAAGAACTGGTCATACCCCAAATCCTGTCTGGAATCAGACATTTGAATTCGATGAGATTAGTGGTGGGGAATACTTAAAAATAAAAGGCTTTTCTGAAGAAATTTTTGGCGATGAAAACATTGGTAGTGCTCATGTGAATTTGGAAGGACTGGTTGATGGCTCAGTCAGGGATGTATGGATCCCTCTTGAAAGAGTGCGTTCTGGAGAATTAAGACTTCAGATATCGGTTCGAGTGGATGACCGAGAAGGATCGAAGAGTTTGGGTTCTGGCTCAGCCAATGGTTGGATTGAACTTGTTCTGATAGAGGGAAGGGATCTTGTTGCTGCCGATCTCAGAGGCACAAGTGATCCATATGTGAGGGTACACTACGGAAGCTTTAAGAAAAGGACAAAGGTCATATACAAAACTCTTAATCCTCAGTGGAACCAGACCTTAGAGTTCTCTGATGATGGAAGTCCCCTAATGCTTTATGTCAAAGATCACAATGCATTATTGCCCACATCAAGTATAGGTGAATGTGTTGTAGAATATCAAAGGTTGCCTCCAAACCAGATGGCTGACAAGTGGATACCTCTCCAAGGGGTGAAAAGGGGTGAAATTCATGTCCAAATCACTAGAAAAGTTCCAGAGTTGCAGATGAGGCAAAGTCTAGACTCTGAACCTTCCCTGAGTAAACTTCACGAAATTCCAAACCAGATAAAACAGATGATGATAAAGTTCAGGTCCTTCATAGAGGATGGAAATCTTGAAGGACTCTCTACAACATTGAGTGAGCTAGAAACTCTTGAGGATACACAGGAAGGGTATATATCTCAGCTGGAGACTGAACAAATGCTTCTTCTCAGCAAAATAAAGGAACTTGGTCAAGAGATCATTAATTCTTCTCCTTCCCTCAGCAGAAGATCTTCTTCAGCTGGAAACTGA 2481 0.424 MSLKKRVLSINIEEAAVDFFNHLLQEKPRIPVFIPLILIAWAVERWLFSASSWVPLALAVWTTIQYGRYQRKLLVEDLDKKWKRIILNVSPITPLEHCEWLNKLLTEVWSNYFNAKFSIRLSAIVEKRIKLRKPRLLERVELQEFSLGSCPPSLALRGMRWSTIGDQRFLQLGFDWDTSEMSILLLAKLAKPLIGTARIVINSLHIKGDLLATPILDGKALLYSFVSTPEVRIGVAFGSGGSQSLPATEWPVVSSWLEKLFADTLAKTMVEPRRRCFTLPAVDLRKKAVGGIIYIRVISANKLSGSCFKTSRRQSNGATNGYTEDNFDDKDLETFVEVEVEELTRRTDVRMGSTPRWDAPFNMVLHDNTGTLRFNLYQSHPNNVRCDYLASCEIKLRHVEDDSTIMWAVGPDSGVIAKQAQFCGEEIEMVVPFEGPNSAELKVSIVVKEWQFSDGSHSLNSIRSTNSQQSINGSPNIQLKTGRKISVIVVEGKDLAARDKSGKFDPYIKLQYGKVVQKSRTGHTPNPVWNQTFEFDEISGGEYLKIKGFSEEIFGDENIGSAHVNLEGLVDGSVRDVWIPLERVRSGELRLQISVRVDDREGSKSLGSGSANGWIELVLIEGRDLVAADLRGTSDPYVRVHYGSFKKRTKVIYKTLNPQWNQTLEFSDDGSPLMLYVKDHNALLPTSSIGECVVEYQRLPPNQMADKWIPLQGVKRGEIHVQITRKVPELQMRQSLDSEPSLSKLHEIPNQIKQMMIKFRSFIEDGNLEGLSTTLSELETLEDTQEGYISQLETEQMLLLSKIKELGQEIINSSPSLSRRSSSAGN* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g02080 826 CDD C2 615 711 - -
Phac4g02080 826 Pfam C2 domain 484 581 IPR000008 -
Phac4g02080 826 Pfam C2 domain 615 711 IPR000008 -
Phac4g02080 826 Pfam C2 domain 292 402 IPR000008 -
Phac4g02080 826 Coils Coil 789 809 - -
Phac4g02080 826 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 94 280 IPR031468 GO:0008289
Phac4g02080 826 PANTHER OS01G0128800 PROTEIN 9 822 - -
Phac4g02080 826 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 325 405 IPR035892 -
Phac4g02080 826 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 606 724 IPR035892 -
Phac4g02080 826 CDD SMP_SF 117 277 - -
Phac4g02080 826 ProSiteProfiles C2 domain profile. 596 709 IPR000008 -
Phac4g02080 826 Gene3D C2 domain 469 597 IPR035892 -
Phac4g02080 826 Gene3D C2 domain 598 726 IPR035892 -
Phac4g02080 826 ProSiteProfiles C2 domain profile. 463 579 IPR000008 -
Phac4g02080 826 SMART C2_3c 484 578 IPR000008 -
Phac4g02080 826 SMART C2_3c 292 408 IPR000008 -
Phac4g02080 826 SMART C2_3c 614 708 IPR000008 -
Phac4g02080 826 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 484 594 IPR035892 -
Phac4g02080 826 Gene3D C2 domain 290 425 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g02080 Phac-Chr4 47195090 47202973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac4g02080 452 746 Lipid Metabolism Gene Families AT3G61300 24.269 3.82e-11 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g02080 - - gmx:100789237 1496.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac4g02080 4 47195090 47202973 Phac4g02080 4 47195090 47202973 ECH