Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g01702 ATGGGTGTGGATATACAAGGTAAGCTTCGGTTAGCTCTCGGCTCAGTGAAAGATCATGCCTCTATTGGCAAGGCCATGATGTATCACTACCAACATGATGGCTTTTCCAACATAGAGATTGCAGTCCTGCGTGCTACTGGCCATGATAATGGCGCCATTGGTGACAGATACATGCATGAAATCCTCTTTCTTGTGTCAAACTCTCCAGGGTCCATTCCTTTTCTGGCTGAAAGGATTTCACATCGCCTAGGAAAAACTAAGGATCATGTTGTAGCCCTCAAGACCCTTGTCTTGATTCATCGCCTTCTTAGAGGGGGAAACAGGTCCTTTGAACAAGAGTTATGCAAGGCACATGTCTCAGGTCACCTACAAATTAGTACAAGGTGTTTCACAAAGAGTTCTGATCACCCTTCAGTTGGTTTCCTACATACATATGCAGCTTATCTTGAAGAGAGGATGAGTTGGCTCATAAACCAAGCAGGGAAACTTGAGCCTGTCATGTCCAAGGGGTTAGAGTTTAGGCGCTATGATGAGAAATCCTTTGATATGGCATTCAGAATATTGCCTAAATGCCAAGTGCTTATTGATAAGGTGTTGGAATGCTCACCACATCATATTTTGTGCTCAGATCATAGCCTGGCTCGAGCTGCTATGAGCAACACCTTGAGAGAAAGCTTCCAAGTTTATATGACATTTTCTGAAGGCATTGCAGCTCTTGTGAACATGTTTTTTGATCTAACAGCATCAGCCAGAGGCCTAGCCTGTGAAATACTCAAGACAGCTTCTCTCCAGAGCCAAAAGCTTCATGATCTGTATGAAAGTTGCAAACATGTGGTTGAAAACAAGAATTTGGATTACCCTTCTGTTCAAATAATCAGTATGAGTCATATAGTGGCATTGGAACAACTTGGTAGTCAACAAAATGAACTTGCAACTTCACATGTCTCTCTATCTAGCATCTCAAGTCCACCTCCAATTTCAGGCCTCTTAACAAAATCAAAAGAGATAGAGTTGGAAGTAGCAGCAGAAGAAAACAAAAGGAATGAAGAGAATGATGTAAACCTGTCACCAACCCCAACTCTTTTTTCATGGACACTAGAGACTAAAATAAGCATGGTGTGGGTGGTGTTTGAAGATGAATTTCCCAATGAATCACAAGTTCTTCCAGCACAGCAAAAGCTTGGAATTGTTGATGCTGTTACTGGTATAAAAAGTGAATATGGTAGGCCTAGTGTGTTCCTGAATCCATTTACATCTACTTTTCAAACAAGCATGTCATCAAAGGTATGA 1290 0.4163 MGVDIQGKLRLALGSVKDHASIGKAMMYHYQHDGFSNIEIAVLRATGHDNGAIGDRYMHEILFLVSNSPGSIPFLAERISHRLGKTKDHVVALKTLVLIHRLLRGGNRSFEQELCKAHVSGHLQISTRCFTKSSDHPSVGFLHTYAAYLEERMSWLINQAGKLEPVMSKGLEFRRYDEKSFDMAFRILPKCQVLIDKVLECSPHHILCSDHSLARAAMSNTLRESFQVYMTFSEGIAALVNMFFDLTASARGLACEILKTASLQSQKLHDLYESCKHVVENKNLDYPSVQIISMSHIVALEQLGSQQNELATSHVSLSSISSPPPISGLLTKSKEIELEVAAEENKRNEENDVNLSPTPTLFSWTLETKISMVWVVFEDEFPNESQVLPAQQKLGIVDAVTGIKSEYGRPSVFLNPFTSTFQTSMSSKV* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g01702 429 Gene3D ANTH domain 169 317 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Phac4g01702 429 CDD ANTH_N_AP180_plant 38 155 - -
Phac4g01702 429 SMART enth_2 36 165 IPR013809 -
Phac4g01702 429 SUPERFAMILY GAT-like domain 175 302 - -
Phac4g01702 429 ProSiteProfiles ENTH domain profile. 30 163 IPR013809 -
Phac4g01702 429 FunFam Putative clathrin assembly protein At1g33340 170 313 - -
Phac4g01702 429 Gene3D - 8 157 IPR008942 -
Phac4g01702 429 Coils Coil 333 353 - -
Phac4g01702 429 SUPERFAMILY ENTH/VHS domain 37 154 IPR008942 -
Phac4g01702 429 FunFam putative clathrin assembly protein At1g33340 13 157 - -
Phac4g01702 429 PANTHER CLATHRIN ASSEMBLY PROTEIN 10 359 IPR045192 GO:0048268|GO:0072583
Phac4g01702 429 Pfam ANTH domain 38 303 IPR011417 GO:0005543
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g01702 Phac-Chr4 44232821 44235841 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g01702 - - gmx:100808531 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac4g01702 4 44232821 44235841 Phac4g01702 4 44232821 44235841 ECH