Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00362 ATGAGCAACGTGTTCGAGGGATACGAACGCCAATACTGCGAGCTCTCGGCGAATCTAGCGAAAAAGTGCACTGCTGCCGGTGCTCTTAATGGAGAGCAAAAGAAACAAAAAGTTTCTGAAATAAAGACTGGGATTGATGAAGCTGAAGCTTTGATTCGAAAAATGGACCTCGAGGCAAGAAGTTTGCAGCCAAACATCAAGGTTGTGCTTCTTGCTAAGTTGAGGGAGTACAAATCGGATCTAAACAATCTTAAAAGCGAAGTTAAGAAAATCGTATCTGGTAACTTAAACCCTTCGGCACGGGATGAATTGTTGGAATCAGGCATGGCAGATGCCATGACGGCATCTGCTGACCAGAAAACAAGATTAATGGTGTCAACTGAGAGGTTGAATAAGACCAGTGATAGAGTTAAGGATAGTAGGAGAACAATGTTGGAAACAGAAGAGCTTGGTGTCTCGATTCTTCAAGATTTGCATTCACAGCGCCAATCTCTATTGCATGCACATAACACGCTCCATGGAGTGGATGATAACATAGGCAAGAGCAAGAAAATTTTGACCAACATGTCAAGAAGGATGAACAAGAACAAATGGATTATTGGTGGCATTGTTTTGGCTCTGGTTGTTGCTATCATCGTCATCCTGTACTTCAAACTTTCTAAATAG 666 0.4219 MSNVFEGYERQYCELSANLAKKCTAAGALNGEQKKQKVSEIKTGIDEAEALIRKMDLEARSLQPNIKVVLLAKLREYKSDLNNLKSEVKKIVSGNLNPSARDELLESGMADAMTASADQKTRLMVSTERLNKTSDRVKDSRRTMLETEELGVSILQDLHSQRQSLLHAHNTLHGVDDNIGKSKKILTNMSRRMNKNKWIIGGIVLALVVAIIVILYFKLSK* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00362 221 Coils Coil 67 87 - -
Phac4g00362 221 FunFam Vesicle transport through interaction with t-SNAREs homolog 1A 1 99 - -
Phac4g00362 221 Pfam Vesicle transport v-SNARE protein N-terminus 12 90 IPR007705 GO:0006886|GO:0016020
Phac4g00362 221 Gene3D - 117 197 - -
Phac4g00362 221 SUPERFAMILY t-snare proteins 6 93 IPR010989 GO:0016020|GO:0016192
Phac4g00362 221 SUPERFAMILY SNARE fusion complex 130 189 - -
Phac4g00362 221 CDD SNARE_Vti1 127 188 - -
Phac4g00362 221 Gene3D - 1 96 IPR038407 -
Phac4g00362 221 PANTHER VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATED 14 216 - -
Phac4g00362 221 Pfam Snare region anchored in the vesicle membrane C-terminus 128 193 - -
Phac4g00362 221 PIRSF Membrin-2 2 218 IPR027027 GO:0005484|GO:0005794|GO:0016192
Phac4g00362 221 FunFam Vesicle transport through interaction with t-SNAREsB 117 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00362 Phac-Chr4 4541930 4546278 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00362 K08493 - gmx:100815385 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac4g00362 4 4541930 4546278 Phac4g00362 4 4541930 4546278 ECH