Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac4g00111 ATGGGCGCCGATGAAAGCGACAGCATGGCACAAGGATCATCTCCTATGCCAGAAAGCGAGAGCGTGGTTCGAGGTTCGGAGCAGGGGAAGGAGCTTAGGGAAGTTGTTGGGGGTTTGGGAAGTGAGGAGGGGTGTGGTGGGGTTGCTGTTAATGAGGATGGGTTTTCTGGCATTGAAAACCGAGGTTTGGGTGATGAAGGGGTTGTTAACGTTGTCAATAACAGTAATGTCTTGGAGGCCAAGGTTTCAGTTGTGAGTGGAAATGATTGTCAAGTTTTGACTGATTCTGAGGTGAATGGGATGTCCTCTTGGTTAGGAATGCAAGAAAGTGATATGAGCACGGTGTTTTCTAGTGATGGAGCTGAGAAGCTGGACTATGATTATGCATCTGAGAAGATGGACTATATGTTTGCTTCTGAGATGGAAGAGGCTGCTGTTTTGAGTTTGGATGGATCGGTAGGGAATGGTGGAGAACATGGTAGTGATGGAGGCAGGAGCAGCGAGGAAGAAAAATATGAAGATTGTGTTGCCGATAATGTCACTGTTGCTTCGGAGAGTAGAGTAGCAGAAGTTGCTGTTTTAAGTTTGGATGGATCGGTAGGGGATGGTGGAGAACATGGAAGTGATGGAGACAGGAGCAGCGAGGAAGAAAAATATGAAGATTGTGATGCCGATAATGTCACTATTGCTTCGGAGAGTAGAGTAGCAGAAGTTGCTGTTTTGAATGGGGATAGTTTGGTAGGGGTTGGTGCTGAACACACAATAGATGGGAAGGAAAGAGAAGACTGTGATGGTTATGACAGAAGAGAAGAGGATATGAGCGAAGAGGAAGATAAAGATGAAGATCCTGATGGGCACATCGTGGTTGGGGTTGATGGGCAAGGCAGAAGTGAAGAGGGAGGTAAAGATGAAGACTGTGATGGGAATGATGTGACTATTACTTCTGAGAGTAGGCCAGCAGAAGCTTCTGTTCTGATTGTGGATAGGTCGGTAGGAGTTGGCAAGGAAGATGGAAGAGAAGACGATATCAATGAAGAGGAAGGTGTTGATGGAAACTGTGATGGGAATGTTCTGACTATTACTTCTGCGAGTAGGATAGCAGAAGCTGCTGTTTCGAGTGTGGATACTCTTGCCAGGGAAGAAAGAAGAGAAGAGAATATCAGTGAGGAGGAAGGTGGAGGCGAAGACCGTGATGGGAATGTTGTGACTATTACTTCTGACAGTAGAGTAGCAGAAGCTGCTGTTTTGAGTCTGGATAGTTTTGTAGGAGTTGGAGGGCAAGACAGAAAAGAAGAGGGTATACACGAAGAGGAAGGCAAAGATGAAGACTGTGATGGAGACATTGTTGCTGTTGCTTCTGAGAGTAAAGTTGCAGAAGCTGCTGCTTTGGGTGTGGATAGTTTGATAAATGTTGGTGGGGAAGATACAGCAGGTGAAGACTGTGATGGGAACATTGTGACTCTTGCTTCTCAGAGTAAAGTTGCGGAAGCTACTGATTTTAGTGTGGATAGTTTAGTAGGTCCTGGTGCGTATGACAAAATAGCAGAGGAGGAATGTGAATACAGAGGTAAGAACGAAGAATGTGGTGGGAACATTGTGACTATTACTTCTGAGAATAGAGTAGCAGATGCGGCTGTTTTGAGTGTGGATCGTTCAGAAGTGGTTGGTGTTGAGGAAACAAAAGATGGGGGAGGAAGTGAACAGGTAGAAAAAGACAAAGATTGTTCTGGGAACATTGTGACTATAGAGGTTCCAATTGCAGAGACAAGTGAGAAGATGGATGTAGAAGTGGAGGACTTGAGTGATGAAGGGTATGGTTTTTCTGTTGGTGATTTTGTTTGGGGTCAAGGCGAGAGTCAACTTTGGTGGCCCGGCCGGATTTATGACCCATCTGATGCATCTGACGTTGCATTGAAGCTGAAACAAAAAAACAGACTTCTGGTTGCCTACTTTGGGCATGGAGCCTTTGCGTGGTGTCATCCATCGCAGTTAAAGTCTTTTGAGGATAACTTTGATGATATGCTTAAACAGAGTAGCTGCATTGATTTTGTCAATGCTGTGCAAGAAGCTGCAAGAGAGGTCGGAAGGCTTCTGTCTATGAAGCTGAGTTGTTTAGTTCTTGACAAGAAAACAGGTTCTGAATCTACTCTCCTGTTGGGGAAAAATTCTGGAATCAAGGAAGGAGTTCTTGTTCCAGAAACTGGCATAGAGAGACTTTTATATAGTCAATTTGAGCCAGTAGAATTACTTTCTCATATGAATCAAATTGCACGAATTGTTGATAGTGGTAGTAGTATTATGGAGCTGGAGATCTTAAAGGCTCGACTTGCGGCATATTATCTGTCAAAAGGGCATAAATTACCTAATTTTATGGATACCCAGTTGGCTCCTGGAGTTGAAGATAGTCTAACGGATGAAACAGTTGCTGTAGAGAACAGTAGAAGTACTGTGGAAGCCCCGACCCAAGGACCATTTGATGAACTGGGTCATTCTCCAGGGCTCCCAGGGAACATATCAAACCATGTTAGAAAGCAGAAAAGCATTGCTGAAATTATGAGGGAGGACAAAGATGTTCATACAGCAAGTAGGGAGGTGGAGGCAAGTGGCTCAAATGGTAGAAGGAAGAGAAAAGGTAGTGAGGCTGGTATGAGATCTAAACCTGTTCAAAAGAAAAAAGAGTTGCTTCTGGACACTGATGAAGATGTGTCAAGTGCTGAACATTGTGCCGAGGAAAACAGTGGCAGCATTGGCTCATGGCTGCAGTCAAAGGAGAAGAAGGAAGTTTTAGATGAAGGGAGGAAGGGTAGTTTGTCTAGAGAAAGGAAGAAAAGTAAGTACTTGTCCCCTCCTTTCACTACTCCAATCAGGGGACAAAGGGAGGAAAGTATTGAAGCAGAATCCCTTGAAGTATCCAGAAAAGTTAAAGCATCACATACAAGCTCAGTGGCTGCTGTCCTGCAATATCCTCCAGTTTATATGGGGAGGCTTTTTGACAGCTCAAATTACCAAACCGAGGAAGATGATGGGAAAAAGGTTATTGATCCAAAGAAAATCCAGGCTCCTGTGGAGGAAGTTCTGTTCCAAGTCCTTAATGCAGCTATTAGTCCACAAGTTCGCAGGGAAGGCACTTCCCTTGATCAATTTGTTGACTTCACTTTTGCCTTTAGAAGTTCATTATATTCTGAAGGATCGTTACGCGATCTATACGAGAAGAATCAGCCTGGAAGGAAAAGAAAGAGGCCAGAATCTGAGGAAGAAGATGGAATGTTGAAAGATGCTCAAATGTCATCACTGAAACAAAATTCTGGGTCAAAGAAGAAAAGAAAGGAAACTGCTTCAGGTAAGAAGGGGGGTGATGAAAATGCTCAAGGTGCGGTTCTTGTTGTTTCATTTTGGCAAGGAACATCCACGCCTTCAAGATCTGAGCTTATCTCAGTGTATAGTAAGTTTGGAGCTCTGAATGAAGCAGAAACAGATGTGTTCAACAATAACTACACAGCTAGAGTGTCCTTCCTGAGAACTTTTGATGCTGAAAATGCATTGAACCATTCTAAAAACAATAACCCTTTTGGATCTGCTGATGCCACTTTTCAGCTCCAGTATCACTCTGAGGGATCAAAGTCTGAAGAACATGGTGAAAGATCAAAGAACAAACCTTTGGTAGCAGCTACATCACCATCGGTTTCAGTCTCACAGGGTGGTGAAGCATCCAGATTGATCTTTATCCAGAAGAAGCTTCAAGGTCTGACTCTGATACTTGAAGCATCAGGTGACAAATCTCCCGATTTGATGGCTGAACTGCAGAGGGAGGTGAAGGCTCTTCTGGAGGATGTCAACCAAATGGTTGAAGCTTCTCTGTTTTAG 3864 0.4397 MGADESDSMAQGSSPMPESESVVRGSEQGKELREVVGGLGSEEGCGGVAVNEDGFSGIENRGLGDEGVVNVVNNSNVLEAKVSVVSGNDCQVLTDSEVNGMSSWLGMQESDMSTVFSSDGAEKLDYDYASEKMDYMFASEMEEAAVLSLDGSVGNGGEHGSDGGRSSEEEKYEDCVADNVTVASESRVAEVAVLSLDGSVGDGGEHGSDGDRSSEEEKYEDCDADNVTIASESRVAEVAVLNGDSLVGVGAEHTIDGKEREDCDGYDRREEDMSEEEDKDEDPDGHIVVGVDGQGRSEEGGKDEDCDGNDVTITSESRPAEASVLIVDRSVGVGKEDGREDDINEEEGVDGNCDGNVLTITSASRIAEAAVSSVDTLAREERREENISEEEGGGEDRDGNVVTITSDSRVAEAAVLSLDSFVGVGGQDRKEEGIHEEEGKDEDCDGDIVAVASESKVAEAAALGVDSLINVGGEDTAGEDCDGNIVTLASQSKVAEATDFSVDSLVGPGAYDKIAEEECEYRGKNEECGGNIVTITSENRVADAAVLSVDRSEVVGVEETKDGGGSEQVEKDKDCSGNIVTIEVPIAETSEKMDVEVEDLSDEGYGFSVGDFVWGQGESQLWWPGRIYDPSDASDVALKLKQKNRLLVAYFGHGAFAWCHPSQLKSFEDNFDDMLKQSSCIDFVNAVQEAAREVGRLLSMKLSCLVLDKKTGSESTLLLGKNSGIKEGVLVPETGIERLLYSQFEPVELLSHMNQIARIVDSGSSIMELEILKARLAAYYLSKGHKLPNFMDTQLAPGVEDSLTDETVAVENSRSTVEAPTQGPFDELGHSPGLPGNISNHVRKQKSIAEIMREDKDVHTASREVEASGSNGRRKRKGSEAGMRSKPVQKKKELLLDTDEDVSSAEHCAEENSGSIGSWLQSKEKKEVLDEGRKGSLSRERKKSKYLSPPFTTPIRGQREESIEAESLEVSRKVKASHTSSVAAVLQYPPVYMGRLFDSSNYQTEEDDGKKVIDPKKIQAPVEEVLFQVLNAAISPQVRREGTSLDQFVDFTFAFRSSLYSEGSLRDLYEKNQPGRKRKRPESEEEDGMLKDAQMSSLKQNSGSKKKRKETASGKKGGDENAQGAVLVVSFWQGTSTPSRSELISVYSKFGALNEAETDVFNNNYTARVSFLRTFDAENALNHSKNNNPFGSADATFQLQYHSEGSKSEEHGERSKNKPLVAATSPSVSVSQGGEASRLIFIQKKLQGLTLILEASGDKSPDLMAELQREVKALLEDVNQMVEASLF* 1288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac4g00111 1287 ProSiteProfiles PWWP domain profile. 609 670 IPR000313 -
Phac4g00111 1287 MobiDBLite consensus disorder prediction 296 311 - -
Phac4g00111 1287 SUPERFAMILY Tudor/PWWP/MBT 603 718 - -
Phac4g00111 1287 Coils Coil 1264 1284 - -
Phac4g00111 1287 MobiDBLite consensus disorder prediction 1 39 - -
Phac4g00111 1287 CDD PWWP 610 693 - -
Phac4g00111 1287 MobiDBLite consensus disorder prediction 204 222 - -
Phac4g00111 1287 MobiDBLite consensus disorder prediction 1066 1120 - -
Phac4g00111 1287 MobiDBLite consensus disorder prediction 376 401 - -
Phac4g00111 1287 MobiDBLite consensus disorder prediction 1069 1092 - -
Phac4g00111 1287 MobiDBLite consensus disorder prediction 150 173 - -
Phac4g00111 1287 Gene3D - 597 701 - -
Phac4g00111 1287 SMART PWWP_4 607 668 IPR000313 -
Phac4g00111 1287 MobiDBLite consensus disorder prediction 195 222 - -
Phac4g00111 1287 MobiDBLite consensus disorder prediction 812 840 - -
Phac4g00111 1287 MobiDBLite consensus disorder prediction 854 907 - -
Phac4g00111 1287 PANTHER ALDOLASE-RELATED 274 1239 - -
Phac4g00111 1287 MobiDBLite consensus disorder prediction 854 962 - -
Phac4g00111 1287 MobiDBLite consensus disorder prediction 376 397 - -
Phac4g00111 1287 MobiDBLite consensus disorder prediction 253 267 - -
Phac4g00111 1287 MobiDBLite consensus disorder prediction 7 21 - -
Phac4g00111 1287 MobiDBLite consensus disorder prediction 268 282 - -
Phac4g00111 1287 MobiDBLite consensus disorder prediction 923 946 - -
Phac4g00111 1287 MobiDBLite consensus disorder prediction 1202 1229 - -
Phac4g00111 1287 MobiDBLite consensus disorder prediction 252 355 - -
Phac4g00111 1287 Pfam PWWP domain 610 693 IPR000313 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac4g00111 Phac-Chr4 1665376 1669239 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac4g00111 - - pvu:PHAVU_004G012100g 2341.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac4g00111 4 1665376 1669239 Phac4g00111 4 1665376 1669239 ECH