Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04250 ATGAGGGAGGTTGTGATTGTTGCCATTGCTGCTACAGTTGGGAATGTTCTGGTTGGATGGGATAGTTCAACCATTGCAGGGGGAATGAGCTACATAAAAAAAGAGTTCAAGCTGGAGAGTGACCCCACACTAGAGGGACTAATCATGTCGACATCATTTCTCACTGGCACTGTTGTTACAATATTCTCTGGGACAGTTTGTGACATGCTTGGAAGGCGTCCTATGCTGATAGTAGCATCGACCATGTTTTTCTTGAGCGGATTGGTGATGCTATGGGCTCCAAATGTTACTGTGATTCTGTTTTCGAGACTATTGAATGGAATAGCCCTTGCACTGGCCATAACACTCACTCCTCTGTACATATCAGAGATATCACCACCTGACATAAGAGGCACTCTCAATACTCTCCCACAGTTTTCCTGCTCTGGGGGAATGTTTCTGGCCTACATCATGGTCTTCTCATTGTCCTTGGTGGATTCTCCAAGTTGGAGAGCAATGCTAGCTGTTGTGTCTATTCCTTCTGTTGCTTACTTTTTTCTAGCTGTCTTTTATCTCCCTGAATCTCCTCCTTGGCTTGTGAGTAAAGGCAGAGTCAGTGAGGCTAAGAAAGTTCTGCAGAGACTTCGCGACACTGAAGATGTTTCAGGAGAACTGGCTTTGCTGGCTGAGGGAATGAGTCCAGCGGGTGAAAGCACGACTGTAGAAGAGTACATAGTTACCCCAGCCGGTGACCTCATGGGCAACAAGGAAGCAGGGAGAGATTGCATAAAGCTGTATGGACCTAACCAAGCAGGAGTTTCAATGGTTGCCCAACAAGTGAGTGGACAAGGTAGCATGGTATTCCGCAGCACTTTAGCCTTGCCTCGCCAGGGAAGCATTGTTGCTCAGGCTCAAAATCTCAGAGACCCTCTAGTCAATCTCTTTGGGAGCGTCCATGATATCAATCCCCCGCCCCTTGATTCTGGTGGTTCAAGAGCCATGCTAATGGGAGACGCATACAGCACTGACAATTTGCATGCTCCATTACTATCATCACAAAGCAGTGCTATGGAGAGGGACAAGGCTTTTGGATTCAAGGATGCATTAGGGACAGGGAATAATGATGCCAACCAAGTACCTAAGAACACTGACATTGGTGGAGGTTGGAAATTGGTTTATAAATCAGCCGAGAGTGGAAGTAAGGAAAAGGGGCTCCAAAGGGTTTATCTGCGTGCAGATCCTAATGCTGTATCTTCTCAACAAGATTCATTTGCTGAGGGCTATGACTTGAATGCAGATAGCAGTGAGGCTTTTCAGGCATCTGCACTTGTCAGCCACTCAGTTCTCTGCCCTAAGAATATGAACATGAAACCAGAAAATGCTGCCAAACGTACAGGTTTTGGTGGTTTGTCAGATATAGGAGTTAGGCGTGCATTAGTTGTTGGAGTTGGACTACAACTTCTTCAGCAGGCTGCTGGCATAAATGGATTTCTATACTATGCTCCCCAGATTCTTGATCAGGCTGGTGTTGGAGCACTTCTGTCAAATTTCGGTATTAGTTCAACATCTGCTTCATTACTCGTAAATATCATTTCAACATTCGCAATGCTTCCTTGTATTTTCACTTCCATGAGGCTCATGGATGTTGCTGGCAGGAGGTCAATACTGTTATACACAATACCAATTCTTATAGTGTCTCTCATGGTACTAATACTCCGGGACTTATTTCACATGAGTGATAACCTGAATGCAATAGTGACTGCAGTGAGTGTGATGGTATACGAAAGCTGCTTCGTCATGGGATTGGGTGCGATTCCCAACATCTTGTGTTCAGAAATCTTCCCAACAAGTGTTCGTGGAATATGCATTTCTATTTGCTCTCTTACGTTCTGGATCAGCATCTTAATAGTGACTTCTTCATTTCCCTTCTTGCTCCAACTCATTGGGATTAGCGGGGTCTTTGGACTGTTCGTAATTGGGTGCATCTCTGCATGGATATTTGTCTACTTGAAAGTTCCTGAAACAAAGGGCATGCCTTTAGAAGTCATCATTGATTTCTTTGCTATTGGTGCAAAGCCTGAATGA 2064 0.4486 MREVVIVAIAATVGNVLVGWDSSTIAGGMSYIKKEFKLESDPTLEGLIMSTSFLTGTVVTIFSGTVCDMLGRRPMLIVASTMFFLSGLVMLWAPNVTVILFSRLLNGIALALAITLTPLYISEISPPDIRGTLNTLPQFSCSGGMFLAYIMVFSLSLVDSPSWRAMLAVVSIPSVAYFFLAVFYLPESPPWLVSKGRVSEAKKVLQRLRDTEDVSGELALLAEGMSPAGESTTVEEYIVTPAGDLMGNKEAGRDCIKLYGPNQAGVSMVAQQVSGQGSMVFRSTLALPRQGSIVAQAQNLRDPLVNLFGSVHDINPPPLDSGGSRAMLMGDAYSTDNLHAPLLSSQSSAMERDKAFGFKDALGTGNNDANQVPKNTDIGGGWKLVYKSAESGSKEKGLQRVYLRADPNAVSSQQDSFAEGYDLNADSSEAFQASALVSHSVLCPKNMNMKPENAAKRTGFGGLSDIGVRRALVVGVGLQLLQQAAGINGFLYYAPQILDQAGVGALLSNFGISSTSASLLVNIISTFAMLPCIFTSMRLMDVAGRRSILLYTIPILIVSLMVLILRDLFHMSDNLNAIVTAVSVMVYESCFVMGLGAIPNILCSEIFPTSVRGICISICSLTFWISILIVTSSFPFLLQLIGISGVFGLFVIGCISAWIFVYLKVPETKGMPLEVIIDFFAIGAKPE* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04250 687 PRINTS Sugar transporter signature 581 602 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phac3g04250 687 PRINTS Sugar transporter signature 15 25 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phac3g04250 687 PRINTS Sugar transporter signature 604 616 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phac3g04250 687 PRINTS Sugar transporter signature 100 119 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phac3g04250 687 PRINTS Sugar transporter signature 482 492 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phac3g04250 687 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 4 681 - -
Phac3g04250 687 ProSitePatterns Sugar transport proteins signature 1. 536 552 IPR005829 GO:0016020|GO:0022857|GO:0055085
Phac3g04250 687 Gene3D MFS general substrate transporter like domains 2 301 IPR036259 -
Phac3g04250 687 ProSiteProfiles Major facilitator superfamily (MFS) profile. 7 669 IPR020846 GO:0022857
Phac3g04250 687 FunFam Monosaccharide-sensing protein 3 2 249 - -
Phac3g04250 687 Pfam Sugar (and other) transporter 463 676 IPR005828 GO:0016020|GO:0022857|GO:0055085
Phac3g04250 687 Pfam Sugar (and other) transporter 7 223 IPR005828 GO:0016020|GO:0022857|GO:0055085
Phac3g04250 687 SUPERFAMILY MFS general substrate transporter 9 674 IPR036259 -
Phac3g04250 687 Gene3D MFS general substrate transporter like domains 451 685 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04250 Phac-Chr3 41189317 41193552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04250 52 687 Organic Solute Cotransporters AT3G51490 49.130 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04250 - - gmx:100792264 1016.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g04250 3 41189317 41193552 Phac3g04250 3 41189317 41193552 ECH
Phac3g04250 3 41189317 41193552 Phac2g01859 2 20754121 20758528 ECH
Phac2g01859 2 20754121 20758528 Phac3g04250 3 41189317 41193552 PCT