Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04207 ATGGGTACCTTCAATATGCTATGGTTATTGCTACCATTCCTGCTTGGTGCCACAGCAGAACAGTGTGGTACACAAGCTGGTGGAGCACTGTGCCCTAATGGGTTATGTTGCAGCAAATTTGGGTGGTGTGGTGACACAGATTCCTATTGTGGAGAAGGTTGCCAGAGCCGATGTAAATCTGGGCCCAAACCTACACCTACACCTACACCTTCAACCCCAACTCCAACACCAAGCAATGGTGATATCAGCAGACTCATTAGCTCTTCTCTCTTCGATCAAATGCTCAAATACCGAAATGATGGACGCTGTGCTGCCCGTGGCTTCTACAAATATGACGCTTTCATTGCTGCTGCTCGCTCTTTCAGGGGCTTTGGCACAACCGGTGACGACAACACTCGCAAGAAGGAGATTGCTGCTTTCTTGGCCCAAACATCTCATGAAACCACAGGAGGGTGGCCAAGTGCACCAGATGGTCCATACGCGTGGGGATACTGTTTTATCAATGAACAAAACCAGGCAGATTATTGTGATGGTGGAGAATGGCCATGTGCTGCTGGTAGAAAATATTATGGACGAGGACCAATCCAACTTACACACAACTACAACTATGGACAAGCGGGTAAAGCACTTGGTCTAGATTTGATAAAGAATCCGGATCTAGTGGCCACAGATGCAACTGTGTCTTTCAAAACAGCCCTATGGTTTTGGATGACTGCACAAAACAACAAGCCATCAAGCCATGACGTGATCACTGGAAGATGGAGACCATCTAGTGCAGACACGTCAGCGGGTCGCCTTCCTGGGTTCGGTGTCATCACCAATATAATCAATGGCGGAATTGAATGCTTGCACAGGCAGGAAAATCTGGTCCAAAATCGGATCGGCTTCTACCAAAGAGCGCAACAATGTGGTAGACAAGCTGGTGGCGCATTGTGCGCAAATAGGTTATGTTGCAGCCAACATGGGTGGTGCGGAAGCACCAGTGAATACTGTGGAACAGGTTGCCAGAGCCAATGCCAAGCTAGTGGCGGCGGCGGAGATGTCAGCAGCATCATCAGCCGCTCTATGTTCGAGGAAATGCTAAAGCACCGGAACGATCCAGCATGTCCTGGGCGTGGATTCTACACCTACGAAGCTTTTCTCACTGCTGCTAGATCGTTCAACGGCTTTGGCACAACAGGTGATGACACCACTCGCAAAAGGGAGCTTGCAGCTTTCTTCGCTCAAACGTCTCATGAAACCACAGGAGGGTGGCCAAGTGCACCAGATGGTCCATACTCGTGGGGATATTGTTTTATCAACGAACGGAACCAGGATGTTTATTGCAGTGGTGGAGAATGGCCATGTGCTGCTGGTAAAAGATATTATGGACGAGGACCAATCCAACTCACACACAACTACAATTATGGGCTAGCTGGAAGAGAACTTGGTTTGGATTTGACGAATGATCCGGATCTGGTGGGAAGAGACAGAGTTGTGGCGTTCAGAACAGCCATATGGTTTTGGATGAGGGCACAAGGAAACAAGCCATCGTCCCATAACGTGATTATCGGAGCATGGACCCCATCTACTGCTGACACGCAAGCGAGGCGGGTTCCCGGGTTTGGTGTCATCACCAACATAATCAACGGGGGACTCGAATGCGGGCGCGGCCCGGATCCGAGGGTCCAAAGTCGGATCGGGTTCTACCAGAGGTACTGTCAGTTGCTGGGTGTCAGCCCAGGAAACAATTTGGACTGCAACAATCAAACCCCCTTTTAA 1761 0.498 MGTFNMLWLLLPFLLGATAEQCGTQAGGALCPNGLCCSKFGWCGDTDSYCGEGCQSRCKSGPKPTPTPTPSTPTPTPSNGDISRLISSSLFDQMLKYRNDGRCAARGFYKYDAFIAAARSFRGFGTTGDDNTRKKEIAAFLAQTSHETTGGWPSAPDGPYAWGYCFINEQNQADYCDGGEWPCAAGRKYYGRGPIQLTHNYNYGQAGKALGLDLIKNPDLVATDATVSFKTALWFWMTAQNNKPSSHDVITGRWRPSSADTSAGRLPGFGVITNIINGGIECLHRQENLVQNRIGFYQRAQQCGRQAGGALCANRLCCSQHGWCGSTSEYCGTGCQSQCQASGGGGDVSSIISRSMFEEMLKHRNDPACPGRGFYTYEAFLTAARSFNGFGTTGDDTTRKRELAAFFAQTSHETTGGWPSAPDGPYSWGYCFINERNQDVYCSGGEWPCAAGKRYYGRGPIQLTHNYNYGLAGRELGLDLTNDPDLVGRDRVVAFRTAIWFWMRAQGNKPSSHNVIIGAWTPSTADTQARRVPGFGVITNIINGGLECGRGPDPRVQSRIGFYQRYCQLLGVSPGNNLDCNNQTPF* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04207 586 Gene3D - 19 60 IPR036861 GO:0008061
Phac3g04207 586 Gene3D - 85 302 - -
Phac3g04207 586 ProSitePatterns Chitinases family 19 signature 2. 493 503 IPR000726 GO:0004568|GO:0006032|GO:0016998
Phac3g04207 586 SUPERFAMILY Lysozyme-like 81 302 IPR023346 -
Phac3g04207 586 ProSiteProfiles Chitin-binding type-1 domain profile. 300 341 IPR001002 GO:0008061
Phac3g04207 586 PANTHER CHITINASE-RELATED 308 584 - -
Phac3g04207 586 FunFam Endochitinase (Chitinase) 433 489 - -
Phac3g04207 586 Pfam Chitinase class I 351 580 IPR000726 GO:0004568|GO:0006032|GO:0016998
Phac3g04207 586 Pfam Chitinase class I 85 300 IPR000726 GO:0004568|GO:0006032|GO:0016998
Phac3g04207 586 FunFam Endochitinase (Chitinase) 167 223 - -
Phac3g04207 586 Pfam Chitin recognition protein 21 58 IPR001002 GO:0008061
Phac3g04207 586 Pfam Chitin recognition protein 302 339 IPR001002 GO:0008061
Phac3g04207 586 PRINTS Chitin-binding domain signature 44 51 IPR001002 GO:0008061
Phac3g04207 586 PRINTS Chitin-binding domain signature 37 44 IPR001002 GO:0008061
Phac3g04207 586 PRINTS Chitin-binding domain signature 29 37 IPR001002 GO:0008061
Phac3g04207 586 CDD ChtBD1_GH19_hevein 20 59 - -
Phac3g04207 586 ProSitePatterns Chitinases family 19 signature 2. 227 237 IPR000726 GO:0004568|GO:0006032|GO:0016998
Phac3g04207 586 FunFam Basic endochitinase 19 60 - -
Phac3g04207 586 Gene3D Endochitinase, domain 2 434 489 - -
Phac3g04207 586 FunFam Basic endochitinase 300 341 - -
Phac3g04207 586 CDD ChtBD1_GH19_hevein 301 339 - -
Phac3g04207 586 SUPERFAMILY Plant lectins/antimicrobial peptides 21 68 IPR036861 GO:0008061
Phac3g04207 586 CDD chitinase_GH19 352 580 - -
Phac3g04207 586 Gene3D Endochitinase, domain 2 168 223 - -
Phac3g04207 586 ProSitePatterns Chitinases family 19 signature 1. 369 391 IPR000726 GO:0004568|GO:0006032|GO:0016998
Phac3g04207 586 Gene3D - 356 586 - -
Phac3g04207 586 MobiDBLite consensus disorder prediction 60 80 - -
Phac3g04207 586 SMART ChitinBD_3 21 58 IPR001002 GO:0008061
Phac3g04207 586 SMART ChitinBD_3 302 339 IPR001002 GO:0008061
Phac3g04207 586 SUPERFAMILY Lysozyme-like 347 586 IPR023346 -
Phac3g04207 586 ProSitePatterns Chitin recognition or binding domain signature. 312 331 IPR018371 GO:0008061
Phac3g04207 586 CDD chitinase_GH19 86 299 - -
Phac3g04207 586 ProSiteProfiles Chitin-binding type-1 domain profile. 19 60 IPR001002 GO:0008061
Phac3g04207 586 SUPERFAMILY Plant lectins/antimicrobial peptides 302 342 IPR036861 GO:0008061
Phac3g04207 586 ProSitePatterns Chitin recognition or binding domain signature. 31 50 IPR018371 GO:0008061
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04207 Phac-Chr3 40905910 40916880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04207 300 586 Glycoside Hydrolase AT3G12500 68.027 1.20e-137 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04207 K20547 - tpra:123882427 830.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g04207 3 40905910 40916880 Phac3g04207 3 40905910 40916880 ECH