Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04145 ATGAGCGCTACTAGGTTCATCAAGTGTGTCACGGTTGGAGATGGAGCTGTTGGCAAAACTTGTTTGTTGATCTCCTATACCAGCAATACCTTCCCAACTGATTATGTGCCAACAGTTTTTGACAATTTCAGCGCAAATGTGGTGGTGAATGGAGCCACTGTTAATCTGGGATTGTGGGACACTGCTGGACAAGAGGATTACAACAGATTACGACCATTGAGTTATCGAGGTGCCGATGTTTTCATATTGGCTTTTTCTCTCATAAGCAAGGCCAGTTATGAAAATGTTTCCAAGAAGTGGATTCCAGAGTTAAAACATTATGCACCTGGTGTTCCCATTATTCTGGTTGGCACCAAGCTTGATCTTCGAGATGATAAGCAGTTCTTCGTAGACCATCCAGGTGCTGTACCTATCACCACTGCTCAGGTACATGTAATGTTTTTTTGTCCTTCTGAAGTGGTTTTTTTGTAA 471 0.4246 MSATRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVVNGATVNLGLWDTAGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYAPGVPIILVGTKLDLRDDKQFFVDHPGAVPITTAQVHVMFFCPSEVVFL* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04145 156 ProSiteProfiles small GTPase Rho family profile. 1 156 - -
Phac3g04145 156 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 126 IPR027417 -
Phac3g04145 156 Gene3D - 1 148 IPR027417 -
Phac3g04145 156 SMART rab_sub_5 7 154 - -
Phac3g04145 156 PANTHER RHO FAMILY GTPASE 5 146 IPR003578 GO:0005525|GO:0007264
Phac3g04145 156 SMART rho_sub_3 9 149 IPR001806 GO:0003924|GO:0005525
Phac3g04145 156 CDD Rop_like 6 142 - -
Phac3g04145 156 NCBIfam small GTP-binding protein domain 7 125 IPR005225 GO:0005525
Phac3g04145 156 PRINTS Transforming protein P21 ras signature 109 122 - -
Phac3g04145 156 PRINTS Transforming protein P21 ras signature 47 69 - -
Phac3g04145 156 PRINTS Transforming protein P21 ras signature 7 28 - -
Phac3g04145 156 PRINTS Transforming protein P21 ras signature 30 46 - -
Phac3g04145 156 ProSiteProfiles small GTPase Ras family profile. 2 156 IPR001806 GO:0003924|GO:0005525
Phac3g04145 156 SMART ras_sub_4 4 154 - -
Phac3g04145 156 FunFam Rho family GTPase 4 147 - -
Phac3g04145 156 ProSiteProfiles small GTPase Rab1 family profile. 2 156 - -
Phac3g04145 156 Pfam Ras family 8 127 IPR001806 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04145 Phac-Chr3 40599781 40601769 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04145 5 125 EF-hand Containing Proteins AT5G27540 27.273 6.43e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04145 K04392 - rcu:8268087 289.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g04145 3 40599781 40601769 Phac2g01669 2 17117844 17121026 ECH
Phac3g04145 3 40599781 40601769 Phac3g04145 3 40599781 40601769 ECH
Phac2g01669 2 17117844 17121026 Phac3g04145 3 40599781 40601769 PCT