Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04143 ATGGCAAAGAGAAACTGCTTCGTTATTCTGTCATCGGAAGATGAAGATGCTACTTCTAACGCTCCTTCGTTGAGTTCGAGTCGCAGCTATACGAAGACGAATTCGAATTCGAAGTCGAAGTCGAGGTCCACCTCGACATCCTCTCGGGGAAGGAAGAAGCCACGTGTTTCGCATTCTCGCTCTCACCTCTCCAAACTGCACGAGATAGATTTATTTGGAGATGACTTCAATGAAGTGTTTACTGGGTCAAAGGTATCCGCTGGTACTCAAAGGAGCTTTGCGGAGGAGTTATGGGTTGATAAATACAAGCCCAATTCACTGGAAGAGCTTGCTGTTCACAAGAAAAAGGTTGAAGATGTTAAGACGTGGTTTGAAGAGAGGTTGAAACCTTCGAAGGGTGTCTACAATAATAATGTTCTCCTCATCAGTGGTCAGGCTGGAGTTGGAAAATCTGCTGCTATTCATGTAATTGCATCTCATCTGGGAGCAATAGTTTATGGGTGGAACACACCTACACCTGTAATTTGGCAGGAGCATCTCTATAATTCTGGCATAGGGACTCAATACACATCCAAGTTAGATGAATTTGAAAGTTTCGTTGAGAGAGTACGAAAATATGGATTATTGCTAACTTCCTATACTGGGGAGTCAAAGCCTCCCATCATACTTTTAATAGACGATCTTCCCATGACTAATGGGAAATCTGCTTTTGGAAGACTTAAAAATTGCTTGCAATTTTTGGTGAAATCAACTCAGATACCAACAGCAATATTGTTAACTGACTATGGAAATGCTGACTCAGTAGATTATAATGCTCGTTGCCTGGAAGAACTGAAGCTATCTCTAGAGAGTTCTGGGGCTTGTAAGGTTGCTTTCAATCCAATTACAGCGAATTCTATGAAGAAGATTCTCTTTAGAATATGCCAAATGGAGCAGTGCGATGTGACTGCTGAGTATGTTGATCTAATAGCAAAAACAAGTGGAGGCGACATCAGACATGCAATCACTTCTTTACAGTTTTTCTGCCTGAAACCAAATCTAGTGCATTCTTTGGCCTCATCTACTTGTTCTCATGGTCCATTGAACGAGGAAAGTAATAAACCTGTTAGATCAGATTATGGATATTCATTGCACTTTGGCAGAGATGAAGCATTATCTCTATTTCACGCTTTGGGGAAATTTTTGCATAATAAAAGGGAGACTGGAGTTGCAACAGAATATGTTCTGGATTTTTTGGATGATGAGGCAATAGATGACGCATGGACTCTGTCTTCATATCTAGGTGATGCTGACATTCTTCTTGCCAAACAACGGGGTAGTTATAACGAGGCAGAGGGTGTTTTACAGTCAGCTGCTGCATCCATATCAGTTCGTGGGGTGCTATTTGGAAATTCTAATCCACTATCCTCCAGGTGGCATGCAGTTCGGCGACCAAAGCTCTGGCAAGTTGAGAAAGCATCATTATACAAGAATGTGGTGGATAGGCTCAGAATCCCTGCCTGTAAACGGTTTAGTTCTTATCATATGTCAATTATGGCCACTGAGTACATGCCCATGCTTAAATTGCTCGGAAATAGAGCATGTGGTGGATATGATGGACCGAGTCAGAAATCATTACGGAACTTGGAAATGGAAGACTTTGATTTCGACAAAATGGATTTAGATGAACAATCTAGAGGCATTTCCGATGATGACATAGAAGATTGGTAG 1710 0.4158 MAKRNCFVILSSEDEDATSNAPSLSSSRSYTKTNSNSKSKSRSTSTSSRGRKKPRVSHSRSHLSKLHEIDLFGDDFNEVFTGSKVSAGTQRSFAEELWVDKYKPNSLEELAVHKKKVEDVKTWFEERLKPSKGVYNNNVLLISGQAGVGKSAAIHVIASHLGAIVYGWNTPTPVIWQEHLYNSGIGTQYTSKLDEFESFVERVRKYGLLLTSYTGESKPPIILLIDDLPMTNGKSAFGRLKNCLQFLVKSTQIPTAILLTDYGNADSVDYNARCLEELKLSLESSGACKVAFNPITANSMKKILFRICQMEQCDVTAEYVDLIAKTSGGDIRHAITSLQFFCLKPNLVHSLASSTCSHGPLNEESNKPVRSDYGYSLHFGRDEALSLFHALGKFLHNKRETGVATEYVLDFLDDEAIDDAWTLSSYLGDADILLAKQRGSYNEAEGVLQSAAASISVRGVLFGNSNPLSSRWHAVRRPKLWQVEKASLYKNVVDRLRIPACKRFSSYHMSIMATEYMPMLKLLGNRACGGYDGPSQKSLRNLEMEDFDFDKMDLDEQSRGISDDDIEDW* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04143 569 CDD HLD_clamp_RFC 295 340 - -
Phac3g04143 569 Gene3D - 95 276 IPR027417 -
Phac3g04143 569 MobiDBLite consensus disorder prediction 45 60 - -
Phac3g04143 569 FunFam RAD17 checkpoint clamp loader component 95 276 - -
Phac3g04143 569 Pfam Rad17 P-loop domain 95 264 - -
Phac3g04143 569 Gene3D - 297 360 - -
Phac3g04143 569 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 406 536 IPR004582 GO:0006281
Phac3g04143 569 MobiDBLite consensus disorder prediction 13 44 - -
Phac3g04143 569 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 96 344 IPR027417 -
Phac3g04143 569 MobiDBLite consensus disorder prediction 13 62 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04143 K06662 - gmx:100799826 886.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g04143 3 40593274 40597880 Phac3g04143 3 40593274 40597880 ECH