Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04142 ATGCAAGACATGTGGAATGTTCCTCCGGGTTTCAGACCCTCCAAATCTGCACCTTCTTCTCCTGCTAAGCCTCTTGGAGCAGTTCTCAGAACGCGCTCTGAGTCCTTCCATGTCACTCACAAAGTCCCAGTTGGTGACACTCCTTATGTCAGAGCAAAAAACGTTCAGTTGGTGGATAAGGATCCGGAGAAAGCAATTCCACTGTTTTGGGCAGCCATTAATGCGGGAGATAGAGTGGACAGTGCTTTGAAAGACATGGCTATTGTCATGAAGCAGCAAAATCGGGCTGGAGAAGCCATTGAAGCCATTAAATCTCTTCGTAGTAGATGTTCAGATCAAGCCCAAGAATCTCTTGATAACATCCTCTTGGATCTTTACAAGAGGTGTGGAAGACTTGATGATCAAATAGCCCTCTTGAAGCACAAGTTGTACTTAATTCAACAAGGGTTGGCATTCAATGGTAAGCGTACAAAGACTGCAAGATCTCAAGGGAAGAAGTTCCAAGTCTCTGTGGAGCAAGAAGCTACGAGATTGCTGGGAAACTTGGGATGGGCACTGATGCAGCAGAACAACTACATTGAAGCAGAAGAGGCCTATCGTCGGGCACTATCTATAGCTCCTGACAACAATAAGATGTGCAATCTAGGCATTTGTTTGATGAAGCAAGGAAGAATTGGTGAGGCAAAAGAGACACTGTACCGGGTAAAGCCTGCAGTTATGGATGGCCCTAGAGGCTCAGATTCTCATTTGAAAGCCTATGAAAGGGCACAGCAGATGCTGAAAGACCTTGAATCCGAGATGATGAACAAGGGAGTTGATAGGATTGAACAAAGCAGGCTCTTTGAGGCCTTTTTGGGTTCTTCCTCAATATGGCAACCCCAGCCTTGCAAGGACCACCACACAACCTTGTCAACAGCAACAAATTCAGCAAGAAATCACGAAGATTTTGGTGATGAGAACATCAGTTCCAACATAATGACCAAAAATCACACAACATTGCCCCCGTCTAAAGCTACCTCTACGGCTACCAACAAACAAATCATTGCCATGTTGGGGAACTCACTCAATGTTGCAGCTCCTCCATTTTATGCATCAAAATCGGTGTTGAGAGAACCATTTGAGAACCACTCTGAGACCCTTAAGAGAACAAGGTCTGGAAATGCAGCAGGGTCCATGAGAGTAGTTAGTGATGTGAGGGACAGCAACAACAAGTTGCATGTGGAATTAGGAGTGGCAGTGCCAGAGAACAAAACAAGAAGGCTCTCATCAGAGGATGGTGAGAAGAACAAGTTAACAGATTTGTTACCTGATGATGATGACTTTGAAGAGGCCATTCTTGCTGCAATTTTGGGACCCTCCAATGATAATAAAGCCAATGAGACAAGCAGAATCTTGCAGAGGAATAATGACAAGAGGCTTAAGGTTTTTAAGGACATCACACTATCTCTGAGTCCAAGAGCCTGA 1464 0.4481 MQDMWNVPPGFRPSKSAPSSPAKPLGAVLRTRSESFHVTHKVPVGDTPYVRAKNVQLVDKDPEKAIPLFWAAINAGDRVDSALKDMAIVMKQQNRAGEAIEAIKSLRSRCSDQAQESLDNILLDLYKRCGRLDDQIALLKHKLYLIQQGLAFNGKRTKTARSQGKKFQVSVEQEATRLLGNLGWALMQQNNYIEAEEAYRRALSIAPDNNKMCNLGICLMKQGRIGEAKETLYRVKPAVMDGPRGSDSHLKAYERAQQMLKDLESEMMNKGVDRIEQSRLFEAFLGSSSIWQPQPCKDHHTTLSTATNSARNHEDFGDENISSNIMTKNHTTLPPSKATSTATNKQIIAMLGNSLNVAAPPFYASKSVLREPFENHSETLKRTRSGNAAGSMRVVSDVRDSNNKLHVELGVAVPENKTRRLSSEDGEKNKLTDLLPDDDDFEEAILAAILGPSNDNKANETSRILQRNNDKRLKVFKDITLSLSPRA* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04142 487 MobiDBLite consensus disorder prediction 319 338 - -
Phac3g04142 487 ProSiteProfiles TPR repeat region circular profile. 176 209 - -
Phac3g04142 487 MobiDBLite consensus disorder prediction 310 338 - -
Phac3g04142 487 PANTHER PROTEIN POLLENLESS 3-LIKE 2 13 481 IPR044961 -
Phac3g04142 487 Coils Coil 246 273 - -
Phac3g04142 487 ProSiteProfiles TPR repeat profile. 176 209 IPR019734 GO:0005515
Phac3g04142 487 Pfam Tetratricopeptide repeat 178 209 IPR001440 GO:0005515
Phac3g04142 487 SMART tpr_5 176 209 IPR019734 GO:0005515
Phac3g04142 487 MobiDBLite consensus disorder prediction 1 25 - -
Phac3g04142 487 Gene3D Tetratricopeptide repeat domain 54 237 IPR011990 GO:0005515
Phac3g04142 487 SUPERFAMILY TPR-like 57 283 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04142 Phac-Chr3 40589350 40591613 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04142 - - gmx:100788369 809.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g04142 3 40589350 40591613 Phac3g04142 3 40589350 40591613 ECH