Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04134 ATGGGAACCCCTTTAGCTGCAGAGGCTCTCTCTGCTTTTCTACTGCTTTCCTTCTATGCAACACTAGTTTCTACCAAATACATCAACTACAATACCGGTGCTGCTATTGTGCCAGCAAAATTGAATGTTCACCTGGTTCCACACTCCCATGATGATGTTGGTTGGCTCAAAACCGTTGACCAGTACTATGTTGGATCAAACAACAGTATCCAGGGGGCATGTGTTGAGAACGTGCTTGACTCGGTGGTTGTGTCTCTTAAGAAAGACCCAAATAGAAAGTTTGTGTTTGCTGAAATGGCCTTTTTCCATCGATGGTGGGTAGAACAAAGTCCAGAAACACAAGAAGAAGTGAGAAAGCTTGTGGGCGCGGGGCAGCTAGAAATCATAAATGGTGGTTGGTGCATGCACGATGAAGCTGCAACGCACTACATAGACATGATTGATCAAACCACTTTGGGCCATCGATTTATTAAGGATGAGTTTAACAAGACTCCAACCGTTGGATGGCAGATTGATCCATTTGGACACTCTGCTGTTCAGGCTTACCTTCTAGGAGCTGAGCTTGGGTTTGATTCTGTACATTTTGCAAGAATTGATTATCAAGATAGAGCTAAGCGCAAAGCTGATAAGTCTCTTGAAGTTGTTTGGCGTGCCTCCAAAACATTTGGTTCTTCAGCTCAGATTTTTGCCAATGCTTTCCCTGTTCATTATAGTGCTCCAAATGGTTTCAACTTTGAAGTCAACAATGTTGATGTTGATGTTGTTCCTGTGCAGGATGATCCTCTTATTTTTGACTACAACGTTGAACGACGTGTCCAAGACTTTATTGATGCTGCTATTACCCAAGCAAATGTGACGAGGACAAACCATATAATGTGGACAATGGGTGATGATTTCCAGTACCAATATGCAGAGTCTTGGTTCAAGCAAATGGATAAATTAATTCACTATGTTAATAAGGATGGTAGAGTAAATGCTTTGTATTCCACTCCATCTATTTACACCAATGCAAAAAATGCTGCTGATCAAACTTGGCCACTGAAAACTGATGATTACTTCCCGTATGCTGATAGGGCTAATGCTTATTGGACTGGCTATTTCACGAGTCGCCCAGCCTTAAAGCGATATGTTAGGATGATAAGTGGATACTATTTGGCAACGCGTCAACTTGAATCTTTTGTTGGAAAGCAATCAGATAAATACAATACTTTTGGTCTTGGAGATGCTCTAGGAATTGCACAACACCATGATGCTGTCAGTGGCACTGCCAAACAGCATACAACTAATGACTATGCCAAACGACTAGCTATTGGAGTCTCTGAGGCTGAAGCAGTTGTTAGTTCTTCTTTGGCTTGTCTTACTAGTAAGAAATCAAGTGGTCAATGTTCAGCACCTGCATCGGCTTTTGCCCAGTGTCAATTGTTAAATATCAGTTACTGCCCTCCTACAGAAGATGGCATTCCAGACGCTAAGAGTTTGGTAGTTGTGGTGTATAACCCACTTGGATGGAAACGTACTGATATCGTCAAAATACCAGTTAATGATGCTAATCTTGTTGTCAAAGACTCACTGGGCAATAATATTGAAGTACAATATGTGGGTGTGGATGATGTTACAACAAAATTAAGAAAGCTCTATGTGAAGGCTTATTTGGGGGTGTCACCAAAACAAGCCCCAAAGTACTGGCTTCTGTTTCAGGCGTCAGTACCTCCACTTGGATGGAGCACGTACTTCATTTCTAAAGCAACGGGAAAAGGGTCCACAAAAACCGTATCTCACCTGGGCACTCAGAAAGGTGACACCATTGACATTGGGCCCGGAAATTTAAAGATGTCCTTTTCCTCAACCTCTGGACAACTTAAAAGGATGTATAATTCTAGAACTGGAGTGGATATACCTATTCAACAAAGCTATCTCTATTATGGATCTAGTGAGGGTGATGATGATCCTCAGGCTTCTGGTGCATATATATTCCGGCCTAATGGATCCCCTCCAACTATCGTTTCAAGATCAGTTCCCATCAAGGTAATCCGCGGACCACTAGTTCATGAAGTTCATCAGAAATTTAGCTCTTGGATTTATCAGGTTACTAGGCTTTACAAAGACAAAGACCATGCTGAAGTTGAATTCACTATTGGGTCAATTCCTACCGATGATGGAGTAGGAAAAGAGGTGATCACACGAATGACAGCAAATATGGCCACAAACAAGGAGTTTTATACTGATTCCAATGGCAGAGATTTTCTCAAACGAGTTCGAGATCATAGGGATGATTGGCCCCTTCAAGTAACTCAACCAATAGCAGGAAACTATTACCCACTTAATCTTGGAATTTATACCAAGGATAAGAAATCTGAGTTCTCAGTCTTAGTTGATCGTGCCACTGGTGGGGCTAGCATCAAAGATGGTGAGGTGGAATTGATGCTTCATAGGCGTATTCTTCGCGATGATAGTCGAGGAGTTGGGGAACCACTTGATGAACAAGTTTGCGTGAACAATAACGAAACATGTGAAGGACTAACAGTCAGAGGAAATTATTATATCAGCATAGACAAAATTGGAGCTGGTGCACGGTGGCGCCGAACAACTGGTCAAGAAATCTATTCGCCATTCTTATTGGCCTTTACACATGAGAATTTGGAAAGTTGGAAGTCCTCACATTTGACCAAAGGAACGATCATGGATCCAAATTACAGCTTGCCTCCCAATGTCGCTCTGATAACTCTTGAGGAGTTGGAAGGTGGAATTGTGCTTCTCCGTTTGGCACATTTGTATGAGCCAAGTGAAGATGCTGAGTATTCAACTCTAACCAAAGTTGAACTGAAGAAGTTGTTTGCCAAGAAAACGATAAAGGAGTTGAAGGAGGTAAGTTTATCAGCTAACCAAGAGAAGTCAGAAATGAAGAGAATGACATGGAAGGTTGAAGGGGACAAAGGACAAGAACCTCAAGGACTTAGGGGTGGCCCTGTCAGCAGTCCTAATTTGGTTGTTGAGCTTGGCCCCATGGAAATACGAACTTTTCTTTTGAAACTTTAA 3036 0.4206 MGTPLAAEALSAFLLLSFYATLVSTKYINYNTGAAIVPAKLNVHLVPHSHDDVGWLKTVDQYYVGSNNSIQGACVENVLDSVVVSLKKDPNRKFVFAEMAFFHRWWVEQSPETQEEVRKLVGAGQLEIINGGWCMHDEAATHYIDMIDQTTLGHRFIKDEFNKTPTVGWQIDPFGHSAVQAYLLGAELGFDSVHFARIDYQDRAKRKADKSLEVVWRASKTFGSSAQIFANAFPVHYSAPNGFNFEVNNVDVDVVPVQDDPLIFDYNVERRVQDFIDAAITQANVTRTNHIMWTMGDDFQYQYAESWFKQMDKLIHYVNKDGRVNALYSTPSIYTNAKNAADQTWPLKTDDYFPYADRANAYWTGYFTSRPALKRYVRMISGYYLATRQLESFVGKQSDKYNTFGLGDALGIAQHHDAVSGTAKQHTTNDYAKRLAIGVSEAEAVVSSSLACLTSKKSSGQCSAPASAFAQCQLLNISYCPPTEDGIPDAKSLVVVVYNPLGWKRTDIVKIPVNDANLVVKDSLGNNIEVQYVGVDDVTTKLRKLYVKAYLGVSPKQAPKYWLLFQASVPPLGWSTYFISKATGKGSTKTVSHLGTQKGDTIDIGPGNLKMSFSSTSGQLKRMYNSRTGVDIPIQQSYLYYGSSEGDDDPQASGAYIFRPNGSPPTIVSRSVPIKVIRGPLVHEVHQKFSSWIYQVTRLYKDKDHAEVEFTIGSIPTDDGVGKEVITRMTANMATNKEFYTDSNGRDFLKRVRDHRDDWPLQVTQPIAGNYYPLNLGIYTKDKKSEFSVLVDRATGGASIKDGEVELMLHRRILRDDSRGVGEPLDEQVCVNNNETCEGLTVRGNYYISIDKIGAGARWRRTTGQEIYSPFLLAFTHENLESWKSSHLTKGTIMDPNYSLPPNVALITLEELEGGIVLLRLAHLYEPSEDAEYSTLTKVELKKLFAKKTIKELKEVSLSANQEKSEMKRMTWKVEGDKGQEPQGLRGGPVSSPNLVVELGPMEIRTFLLKL* 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04134 1011 Gene3D Glycoside hydrolase family 38, central domain 325 403 IPR037094 GO:0004559|GO:0006013
Phac3g04134 1011 SMART Alpha_mann_mid_2 361 435 IPR015341 GO:0004559|GO:0006013
Phac3g04134 1011 Coils Coil 950 970 - -
Phac3g04134 1011 SUPERFAMILY Families 57/38 glycoside transferase middle domain 361 460 IPR028995 -
Phac3g04134 1011 FunFam Alpha-mannosidase 323 403 - -
Phac3g04134 1011 Gene3D Glycoside hydrolase family 38, central domain 404 459 IPR037094 GO:0004559|GO:0006013
Phac3g04134 1011 FunFam Alpha-mannosidase 471 582 - -
Phac3g04134 1011 Gene3D - 484 601 IPR013780 -
Phac3g04134 1011 Gene3D - 602 869 - -
Phac3g04134 1011 FunFam Alpha-mannosidase 889 1011 - -
Phac3g04134 1011 FunFam Alpha-mannosidase 603 869 - -
Phac3g04134 1011 FunFam Alpha-mannosidase 41 324 - -
Phac3g04134 1011 Gene3D - 893 1011 - -
Phac3g04134 1011 Gene3D Glycoside hydrolase 38, N terminal domain 41 324 IPR027291 -
Phac3g04134 1011 Pfam Alpha mannosidase middle domain 361 453 IPR015341 GO:0004559|GO:0006013
Phac3g04134 1011 Pfam Glycosyl hydrolases family 38 N-terminal domain 42 356 IPR000602 GO:0004559|GO:0006013
Phac3g04134 1011 SUPERFAMILY Galactose mutarotase-like 469 1010 IPR011013 GO:0003824|GO:0005975|GO:0030246
Phac3g04134 1011 FunFam Alpha-mannosidase 404 459 - -
Phac3g04134 1011 SUPERFAMILY Glycoside hydrolase/deacetylase 29 357 IPR011330 GO:0005975
Phac3g04134 1011 CDD GH38N_AMII_LAM_like 41 320 - -
Phac3g04134 1011 PANTHER ALPHA-MANNOSIDASE 14 1011 - -
Phac3g04134 1011 Pfam Glycosyl hydrolases family 38 C-terminal beta sandwich domain 903 1008 IPR041147 -
Phac3g04134 1011 Pfam Glycosyl hydrolases family 38 C-terminal domain 605 819 IPR011682 GO:0004559|GO:0006013
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04134 Phac-Chr3 40538353 40547071 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04134 5 958 Glycoside Hydrolase AT3G26720 60.125 0.0 1210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04134 K01191 - gmx:100775419 1822.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g04134 3 40538353 40547071 Phac3g04134 3 40538353 40547071 ECH