Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04133 ATGGTGCTCGAGGCCACTATGATCTGTATTGACAATTCGGAATGGATGCGCAATGGAGATTACGCCCCTTCTCGATTTCAAGCCCAATCAGACGCCGTCAATCTTATTTGCGGTGCTAAAACCCAGTCTAATCCAGAAAATACGGTTGGAGTTCTCACGATGGCAGGGAAGGGCGTTCGTGTCTTGGTCACCCCTACCAGTGATTTGGGCAAGATCTTAGCTTGCATGCATGGACTAGAAATAGGTGGTGAGATGAACCTAGCTGCTGGCATTCAGGTGGCACAATTGGCTCTTAAGCATAGGCAGAACAAGAAGCAGCAGCAAAGGATTATTGTCTTTGCTGGAAGTCCTGTTAAACATGAGAAGAAAATGTTGGAGATGATTGGTAGAAAATTGAAAAAGAATAGTGTGGCACTTGACATTGTCAATTTTGGCGAAGAAGATGAAGGAAAGAATGAGAAGTTGGAAGCACTCCTTTCTGCCGTCAACAACAATGATACCAGCCACATCGTCCATGTTCCATCTGGTCCTAATGCTCTTTCTGATGTACTAATAAGTACTCCTATTTTTACTGGTGACGGGGAAGGTGGAAGTGGTTTTGCAGCAGCTGCTGCAGCAGGTGGTGTATCTGGATTTGAGTTTGGCGTTGATCCAAACTTGGACCCTGAACTAGCTCTTGCTCTAAGAGTTTCAATGGAAGAAGAGAGAGCCAGACAGGAAGCAGCTGCCAAAAAAGCTGCTGAGGATACTTCCAAACAGGAGAAAGGTGATGAGCAGAAGGCTAGTCCACAGGATACAACAATGACCGAGGGTGCAAGTGCAGCAGCTTCTGAAGCCAATAATAAGAAAACTGATTTGACGGACGATGAGAATGCTTTACTACAGCAGGCTCTTGCAATGTCAATGGACGATCCTGCAATCAGCCATGATGTGAGAGATACAGATATGTCTGAAGCAGCGGCTGATGATCCTGAGTTGGCTCTAGCTCTCCAATTGTCAGTAGAAGATAGCTCAAAGGACCCGACAAGCCAGTCTGACGTCAGTAAATTGTTGGCAGATCAGTCCTTTGTATCTTCTATCCTTGCATCGCTTCCCGGGGTTGACCCGAATGACCCATCGGTCAAAGATTTGCTGGCTTCTATGCAAAATCAGTCTGAGCCTCAGCAGAAGAATGAAGACAAGCCACCGAATGAAGAGGAGAAAAAGTAA 1209 0.4599 MVLEATMICIDNSEWMRNGDYAPSRFQAQSDAVNLICGAKTQSNPENTVGVLTMAGKGVRVLVTPTSDLGKILACMHGLEIGGEMNLAAGIQVAQLALKHRQNKKQQQRIIVFAGSPVKHEKKMLEMIGRKLKKNSVALDIVNFGEEDEGKNEKLEALLSAVNNNDTSHIVHVPSGPNALSDVLISTPIFTGDGEGGSGFAAAAAAGGVSGFEFGVDPNLDPELALALRVSMEEERARQEAAAKKAAEDTSKQEKGDEQKASPQDTTMTEGASAAASEANNKKTDLTDDENALLQQALAMSMDDPAISHDVRDTDMSEAAADDPELALALQLSVEDSSKDPTSQSDVSKLLADQSFVSSILASLPGVDPNDPSVKDLLASMQNQSEPQQKNEDKPPNEEEKK* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04133 402 MobiDBLite consensus disorder prediction 237 287 - -
Phac3g04133 402 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 1 394 IPR027040 GO:0006511|GO:0008540
Phac3g04133 402 MobiDBLite consensus disorder prediction 362 402 - -
Phac3g04133 402 MobiDBLite consensus disorder prediction 262 281 - -
Phac3g04133 402 SMART VWA_4 2 175 IPR002035 -
Phac3g04133 402 MobiDBLite consensus disorder prediction 376 390 - -
Phac3g04133 402 Pfam von Willebrand factor type A domain 6 115 IPR002035 -
Phac3g04133 402 SUPERFAMILY vWA-like 4 175 IPR036465 -
Phac3g04133 402 Gene3D von Willebrand factor, type A domain 3 186 IPR036465 -
Phac3g04133 402 Pfam Ubiquitin interaction motif 289 304 IPR003903 -
Phac3g04133 402 Pfam Ubiquitin interaction motif 221 234 IPR003903 -
Phac3g04133 402 Pfam Ubiquitin interaction motif 322 337 IPR003903 -
Phac3g04133 402 MobiDBLite consensus disorder prediction 237 261 - -
Phac3g04133 402 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 321 340 IPR003903 -
Phac3g04133 402 ProSiteProfiles VWFA domain profile. 5 189 IPR002035 -
Phac3g04133 402 SMART uim 219 238 IPR003903 -
Phac3g04133 402 SMART uim 289 308 IPR003903 -
Phac3g04133 402 SMART uim 321 340 IPR003903 -
Phac3g04133 402 FunFam 26S proteasome non-ATPase regulatory subunit 4 3 186 - -
Phac3g04133 402 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 219 238 IPR003903 -
Phac3g04133 402 FunFam 26S proteasome non-ATPase regulatory subunit 4 homolog 217 303 - -
Phac3g04133 402 CDD VWA_26S_proteasome_subunit 1 188 - -
Phac3g04133 402 CDD PSMD4_RAZUL 343 386 - -
Phac3g04133 402 Gene3D - 217 303 - -
Phac3g04133 402 Coils Coil 229 249 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04133 K03029 - gmx:100780583 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g04133 3 40532803 40537463 Phac3g04133 3 40532803 40537463 ECH