Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04030 ATGTCTGGACCCCTAACTCCAAAGACATCTCTTGAAAAGAGTGATCGTGTTGGTTCATTGAAGAAGAAGTTGAGGAATTCCTTGACAAGGAGTAAGAGAAGAAGCAGCAGCAAGGTCATGTCGGTTGAAATCGAGGATATCCGCGATGCTGAAGAATCCAAAGCCGTTGATGAGTTCCGTCAGGCTCTCATCTTGGACGAGCTACTCCCAGAGAAGCACGATGATTATCACATGTTGCTCAGGTTCCTTAAGGCAAGGAAATTTGACCTTGAGAAATCTAAGCAAATGTGGTCTGACATGCTTCAGTGGAGGAAGGAATTTGGTGCTGATACCATCACCGAGGATTTTGAATTCAAGGAACTGGATGAAGTCTTGCAATATTATCCTCATGGGCACCATGGAGTCGATAAAGAAGGTCGACCAGTGTACATCGAGAGATTGGGCCAAGTCGACGCCACCAAGTTGATGCAGGTCACAACCATGGACCGCTATGTCAAATACCATGTGAAGGAGTTCGAGAGGACATTTGATGTGAAATTCGCAGCTTGCTCCCTTGCTGCAAAGAAACACATCGATCAAAGCACAACCATCCTTGATGTGCAAGGAGTGGGCCTTAAGAACTTCAACAAGCATGCCAGGGAGCTCATCACAGCCCTTCAAAAGATTGACGGAGACAACTATCCTGAAACCTTGAACCGCATGTTCATCATCAATGCAGGTTCTGGATTCAGAATGTTGTGGGGCACTGTTAAATCCTTCCTTGACCCAAAGACCACATCAAAAATCCATGTTCTTGGCAACAAGTACCAAAGCAAATTGCTTGAAATGATTGATGAGAGTGAGTTGCCAGAGTTTTTGGGAGGCAAATGTACCTGTGCCGATCAAGGAGGCTGCATGCGCTCTGATAAGGGCCCCTGGAAGGATGAGGAAATAATGAAGATGGTTCAAAATGGTGAGCACAAATGTTCAAGGAAATGTGAGGCTCCAGTCCTGGAAGAGAAGACTTCTGAGGAACCCGAGACTACTGTGTCCGAGGCAAATCTCACCACACAATTGTCTGTTGTCCTTGGTGAGGCCGTTGCTGCCAAGAGCTACAACTACGAGGACTTTGTCCCCTCTGCTGAAAAAACTGCTTGGAAAAAGGTGGAAGACAATGACAAATATGCAGTAACCAAAGATGGAGCAGATGCATACGCCATGGATTCTTTCAAGATTCACGAGAAAGTGAATTCACAAATCTTCACTGGCGTGATGGCATTTGTGATGGGCATAGTGACGATGGTGAGGATGACCAGGAACATGCCCAAGAAGCTCACAGACGCCAACTTCTACTCCAACTTCGGTGGTGAATACAACAAGGGCCAGGGTAACGACCAAATGACCATGCCTGCAATCTCTCCTCAAGAGTTCATGACTGTGATGAAGCGCATGGCTGAGTTGGAAGAGAAAATGACCAACATGAACAACTTCACCATCTGCATGCCACCTGAGAAGGAGGAAATGCTCAATGCTGCTATCACCCGAGCAGATGCTTTGGAGCAAGAACTCATGGCAACCAAAAAGGCTTTGGAGGATTCCCTTACCAAGCAAGAGGAGCTTTCAGCTTACGTTGAAAAGAAGAAGAAAAAGAAGAAGTTGTTCGCCTGGTAA 1650 0.4624 MSGPLTPKTSLEKSDRVGSLKKKLRNSLTRSKRRSSSKVMSVEIEDIRDAEESKAVDEFRQALILDELLPEKHDDYHMLLRFLKARKFDLEKSKQMWSDMLQWRKEFGADTITEDFEFKELDEVLQYYPHGHHGVDKEGRPVYIERLGQVDATKLMQVTTMDRYVKYHVKEFERTFDVKFAACSLAAKKHIDQSTTILDVQGVGLKNFNKHARELITALQKIDGDNYPETLNRMFIINAGSGFRMLWGTVKSFLDPKTTSKIHVLGNKYQSKLLEMIDESELPEFLGGKCTCADQGGCMRSDKGPWKDEEIMKMVQNGEHKCSRKCEAPVLEEKTSEEPETTVSEANLTTQLSVVLGEAVAAKSYNYEDFVPSAEKTAWKKVEDNDKYAVTKDGADAYAMDSFKIHEKVNSQIFTGVMAFVMGIVTMVRMTRNMPKKLTDANFYSNFGGEYNKGQGNDQMTMPAISPQEFMTVMKRMAELEEKMTNMNNFTICMPPEKEEMLNAAITRADALEQELMATKKALEDSLTKQEELSAYVEKKKKKKKLFAW* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04030 549 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 12 541 - -
Phac3g04030 549 SUPERFAMILY CRAL/TRIO N-terminal domain 49 116 IPR036273 -
Phac3g04030 549 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 120 294 IPR001251 -
Phac3g04030 549 SUPERFAMILY CRAL/TRIO domain 120 316 IPR036865 -
Phac3g04030 549 SMART sec14_4 120 291 IPR001251 -
Phac3g04030 549 CDD SEC14 121 289 IPR001251 -
Phac3g04030 549 SMART CRAL_TRIO_N_2 75 100 IPR011074 -
Phac3g04030 549 MobiDBLite consensus disorder prediction 1 36 - -
Phac3g04030 549 Gene3D - 17 107 - -
Phac3g04030 549 Pfam CRAL/TRIO domain 126 288 IPR001251 -
Phac3g04030 549 Pfam CRAL/TRIO, N-terminal domain 71 99 IPR011074 -
Phac3g04030 549 Coils Coil 502 533 - -
Phac3g04030 549 FunFam SEC14 cytosolic factor 108 320 - -
Phac3g04030 549 Gene3D - 108 320 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04030 Phac-Chr3 39809381 39814124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04030 54 285 Acyl Lipid Metabolism Gene Families AT5G47730 28.455 4.89e-20 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04030 K26544 - gmx:100785716 927.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g04030 3 39809381 39814124 Phac3g04030 3 39809381 39814124 ECH