Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04026 ATGTCATTCTTTTCCTCTTCGACGCCCGATTCAAACCTCGCCACCGCCAAGGCGGTTCTCTCGACGGCGGCCTCGGTGGCCGCCACTGCAATGGTGATACGATCGGTGGCCAGTGAGCTCCTCCCGCCGGAGTTCATGTCCTACGTCAGAGATGGCTTCCGCAGCGCGCTGTCGCGGTTCTCGTCGGAGACAACGATGGTGATCGAGGAGTTCGACGGCCTCGTGAGCAACCAAATCTACGAGGCGGCGGAGACCTACCTCGGCACCAAAATCTCCCCCTCCACCCAGAGACTCAAGGTGACCAAACCCGAAACTGATGAGACCTTCATCCTCACAATGGAGCGCAACGAATGCCTCGACGACGTGTTTAACGGCGTCAAGTTTAACTGGGTGCTGGTGTGCCGTCAAGTGGAGACCCGACACTTCCACAACCCGCGCGACCTGAACGCCTCTTTGAAATCGGAGGTTCGGTCCTTGGAACTGAGCTTCCACAAGAAGCACAAAGACATGGTCCTCAACACCTACCTTCCCTTCATTCTGAAGGAGGCCAAGTCCTTGAAGCAGGCGACGAAGGCCTTGAGGATCTTCACCGTGGATTACAACTGCATGTACGGAAACCCCAACGACGCCTGGGCTGGGATCAATCTGGACCACCCCGCCACGTTTGACACGCTGGCTCTGGAGCGTGACGTGAAGGAGTTTGTGATGAGGGATTTGGAGAGGTTTGTGGCGAGGAAGGAGTATTACAGAAAAGTTGGGAAGGCCTGGAAGAGAGGGTACTTGCTCTATGGCCCTCCCGGTACAGGCAAATCCAGTTTGATTGCTGCTATGGCTAATTACTTGCGCTTTGATGTCTATGACTTGGAGCTCACCGAGATGCAGTCCAATTCCGAGCTCAGGAGGTTGCTCATTGCCATGGCTAATAGGTCCATTCTCGTTGTTGAGGACATTGATTGCACTATTCAGTTTCACGATCGCAGAGCACAGTCCACACCCTCTTCCTCTGCAAATAATAACGACAAACAGGTTACACTATCGGGGTTGCTGAATTTCACTGACGGGTTATGGTCAAGTTGTGGGGACGAGAGAATAATAGTGTTCACAACAAACCACAAGGACAAGCTTGACCCTGCTTTGCTCCGCCCTGGTCGCATGGATGTTCATATTCACATGTCCTATTGCACTCCCTGTGGTTTTAGACAGCTAACTTCCAATTACCTCGGAATCAAAGAACATGATCTCTTCCCACAGATAGAGGAAGAAATTCAGAAAACCCAGGTGACTCCAGCTGAAGTGGCAGAACAGCTTCTGAAGAGCAGCGACATTGAAACTTGCCTTAAACAGCTTATAGATTTCCTGAGAAAAAAGAAAGAAACACAGGAACTGGAGGCTAAAAAGAAGGAACAGGAGGCCAAAGATAAAGAGGAACAACAGATGGAGATTGATGACGGTGGTAAAGGAGAAGAGGTTGATGATGACGAAAAGAGAAGGACAACTGAGTTGAACAACAACAGTTGCTGA 1521 0.5108 MSFFSSSTPDSNLATAKAVLSTAASVAATAMVIRSVASELLPPEFMSYVRDGFRSALSRFSSETTMVIEEFDGLVSNQIYEAAETYLGTKISPSTQRLKVTKPETDETFILTMERNECLDDVFNGVKFNWVLVCRQVETRHFHNPRDLNASLKSEVRSLELSFHKKHKDMVLNTYLPFILKEAKSLKQATKALRIFTVDYNCMYGNPNDAWAGINLDHPATFDTLALERDVKEFVMRDLERFVARKEYYRKVGKAWKRGYLLYGPPGTGKSSLIAAMANYLRFDVYDLELTEMQSNSELRRLLIAMANRSILVVEDIDCTIQFHDRRAQSTPSSSANNNDKQVTLSGLLNFTDGLWSSCGDERIIVFTTNHKDKLDPALLRPGRMDVHIHMSYCTPCGFRQLTSNYLGIKEHDLFPQIEEEIQKTQVTPAEVAEQLLKSSDIETCLKQLIDFLRKKKETQELEAKKKEQEAKDKEEQQMEIDDGGKGEEVDDDEKRRTTELNNNSC* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04026 506 CDD RecA-like_BCS1 235 391 - -
Phac3g04026 506 Coils Coil 450 479 - -
Phac3g04026 506 Pfam Domain associated at C-terminal with AAA 41 134 IPR025753 -
Phac3g04026 506 MobiDBLite consensus disorder prediction 461 500 - -
Phac3g04026 506 Pfam ATPase family associated with various cellular activities (AAA) 261 392 IPR003959 GO:0005524|GO:0016887
Phac3g04026 506 ProSitePatterns AAA-protein family signature. 363 381 IPR003960 GO:0005524|GO:0016887
Phac3g04026 506 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 209 444 IPR027417 -
Phac3g04026 506 SMART AAA_5 256 395 IPR003593 GO:0016887
Phac3g04026 506 MobiDBLite consensus disorder prediction 461 506 - -
Phac3g04026 506 Gene3D - 212 389 IPR027417 -
Phac3g04026 506 PANTHER BCS1 AAA-TYPE ATPASE 21 461 - -
Phac3g04026 506 Gene3D - 390 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04026 Phac-Chr3 39797805 39800529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04026 228 407 Miscellaneous Gene Families AT2G29080 29.787 4.76e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04026 - K08900 gmx:100788420 745.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g04026 3 39797805 39800529 Phac3g04026 3 39797805 39800529 ECH