LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phac3g04015	ATGGAAAGCTTGGCGCATTCTCGCCAACCAAACAAGTTTCCCGTCACAGTTTCCAAGAAAATCACTGGCGCCGCTGGAGGCCCAGGTTTTCCGGCGGAAACTCTATACGACCACGTATACGGCGGCGCGACGAGGTTCGCCGGCGGTCACTCCCTCTCGCCACGCTTCGAGGACTACGGCGAGATTTTCGCCAGCTTCCACGCGCCGCGCGCCTCCGCCATTCCGGTGCTGGATCTTCCGTCGCTCGATGACGGCGAGGTCTTCTTCGACTTCCGAAACGTCGCGTGCGAGTACTCCGAAATTTTCCGAGGCTGCGAAGGCCTCGATTTTTTGCTCTCGTACGAGGACTTGTTTCGGGATGGTGTCTCCGAAGAAGACGACGGTGATGATGCTGAAGAGGAAGAAGCCTGGACGCCGGTGGAAACTGATTCATTTTCCGGAGACTTGGACCATTTTGGAATTAATGAAGGCATGCCAAATGGTGATCATTTGCGGTCTTCTGATGGAATTTCAGAGTTCAACGTTTTGTATCATAAGGTAAATGGTACAGGAAATGAAGCTTTGTCAAAGGGGAAAAGTCATACAAGTCAGCTGCGTGCTACTCCTGAATTCCCTCATGTATTTGATGAAACCACGCACTTTCATAGGACCGATCCTTCCTTACAGGTTGTTGATGATGTTGACCTTGATATGGAATTTAATGCAAGCCAGGCAAGGAGAAACCATCTAAGAGAAATGGAGTCACATCCGATTAATTTTACATCTGGTGAACAGGTTTTTGGTAGTGATCTTGATCTGCACAATGAATGCTGCAGAAATGGTTCTCATTCCTGTGAAACATTCATAACCGTGTCTCACATCAGCCTCAGAACTCTACCCTCTCAAGTGCCGCCCCCTTCTCGGCCACCACCAGTATTGGATGCAAAACAGGAGTACACTAATGGTTTTCATTCAAACAAAGAGGGGGTTGATTTTGAAGAGACCCTAGGTGACACTTCGCCACCTTTCCTTGATGTGGAGGTTGATACAAATTCCTCTGCTGCAGCTATCAAAGAAGTCATGCATAGACCTGAAGCAAAACTTAGGAGTGCCAAGGAATTGAAAGAGAGAAAGAAGGAGTTTTCCGAAAGCAATGTAGATTCAAATTATGATGCAAAAGTTAATGAAGCAAAGACAGCAGTGAATATAACTAAACTTGATAGTTTGAATGATGAGGGTGTGCAGAGAATTGGCAAAAAGAAAATTTCTTCCACAGATGGAGGGCAGAAAACTAGGAAGGCTGCCCCAGAAACTCCGGAATTGTTAGAAGGGGAAAGACTTCTAAACATGTTTGATGAAACACACATCAAGGAGTCCAGGTCATCTCAAGAATCAGATAGACGCACTGGAATTGGGATGTGGAAAGAAGCAACTGAATTTTTTGAATTGGTTGGAACAGAAGAATCTGGGAAGGTAATTACGCCCACAAATCATGGCGATACTAAGAAATTGGTACATGATACCAGAGCAAATGAGTATGGCAAGAAAGAAAAAGAAGTCTTTAACGTCAAAGCTGAATACAAAAAGGTTAAAGAAGTTGAAGGTTCGCAGCAAGAGGGATGCAAGGAGAAATACAAAGCAGGAAATGGGGCTCATGAACAGAGAAAAAACATCAAGAAATCTAAGTTATCTAAAGAGGAGTGCAGGCAGAGAGAGCATGTAAAGAACGAGGAAATGGCTGAAATATTTGAGCTAGAAAAGAGTGAGAAGGAAAGAATGGTTGAGACACAACGCAAGGAGCATAAACAAGTTGAGATCGAGAAATCAAAAGAAGTTGATAGAGAAATGCTCAGTGAAGTACAGTGGAGCACGAAGCATATGGAGAGTGAGAAAAAACGAAAAGAGGATGAACAGCTACAACTGAGTATGAAAAGGCATGAACAGTCTCAGAGAATGAAAGAAAACGGAAAAATTCAAAGAGAAGCTTCTGCTCTTGGAGGTGTAAAGAGTGAGCAACGGGTGAAAGATTCTGTGAAGCTAGAAAAATTTGAAAGATCAAATGAAGCCATTAATCTGGCTAGCCGTAAAGAAAATATGACTTGCAAAATAGAAGATGAAATTATCCTTGAAGCTACACAGATTCAGAACAAGAAGAAATTGAAGGAGACATGTGAAAATGAAGAAATTGGGAAAAGCCGCAAAGGATCTTTTACAATTGAAGAAAATGATGAATGCTTAAAGCATGCTCTTGAGCAGGTAAAGAATGAAAAGGGACTTAAACAGGACTTTGAACTGGAAATGAACGAGGAAAGATCTAGAGTCACTTTTGAGCTGGGGGAAAATGAGCCTTGCGAAAGAGATCAAGGTAAAGAGAAACTTAGTGAAATTTGTGATGGGTATAGAAAAGGAAATAGAGTAAAAGATGTCGGTGATAGCATATGGCTTCAGAATGTTCTGAAACAAGCTCCAGAGCTACAAATGAATATTGGAAATGAGACTCGGGGAAAGAAAGAAATCGACTGCCCATCAGACCTAGCATGTGACTGCGAAGGAACTGTGGATATATCACGTGCGGATAGTCACTCCCAAAAGCGTGAGAGGATGCTCAAAGATGCTGATAAAGATGGAAAAGATAAGGGATTGGACAAGGCTTTGGAACAAACGGAGGGTAATGGAGAAGGGATTCACTTGAATTTTGCAAAAGAAACCAATGAGGAACGTAAAACAGAGAGTGATGACAATCTTCTGGCTGCTCACTCATGCTCCATTCATGAAGAAAATATTTGCATACAGGAGCTACGTCAAGACCCTATAGCTGACCAAGAAATTGGAAAGAGTGTCACTGACTGCAAGGTTGGTGAAAATAAATTGGAAGAGGTATGGTTGGAAAATCTAAAGGATACTGGGAAAAAAGGGGCTTTTGAAATGTCCCGAGGGGAAGTAGAGCATTCAGGAAAGGTGACTTGCACTAGTACAAATGTCAATGTCAACGAGCATAGTTTTAACAGTGAACAGGCATGCACAGAGGAAACTAAGACAGCCCCTCAAATGTCATCGAGCCAAGCTAACCTGTGTGGTGATTATGGAAGGAACACAGTAGCTGATGAACCTGCTACAGTACAAGAAGCGGTAAATATCCAGAAGCCTTCTCAAAGAGCTCATGTATTAAATTCCACCAAAAGCAAAGATAGAAGTCTTGATGAAATTTCTTCCTCAAAAGAGAAAGATGTTGAGAGGATAAGAAGAGAAAGAGAGTTGGAAAAAGATCGTTTCAGAAAGATAGAAGAGGAGATGGAGAGAGAAAGGGAAAGACAGAAAGACAGAATGGCTGTTGACACCGCAGTTCTGGAGGCTGAAAGGGAAAGGGAAAGAGGAAAGGATCGGATGGCAGTTGATAAAGCAACTTTGGAGGCTCGTGATAGAACATATGCTGAAGCTCGTGAGAGAGCAGAAAGGGCTGCATTTGAGAGAGCAACTGCAGAAGCTCGACAGAGAATACTGGCTGAAGCCAGAGAAAGACTTGAAAAGGCATGTGCTGAGGCCAGGGACAAAACATATGCTGATAAGGCTGCTTCAGAAGCCAGACTGAAAGCACAGCGAACTGCTGTGGAAAGAGCAACTGCAGAGGCTCGAGAGCGTGCAATGGAAAAAGTAAAGGTTGAGAGAGCGGCATCAGAGTCCAGAGAACGATTAGGGAGATCTGTCTCTGACAAATTTAGTGTTTCTTCCAGAAACGGCGGAAGACAGGGCTCTTCATCCTCAGATATTCTGGATCCATTTTGTCAGAACTCTAGTTCCTCCACTCATTCCAGATATCCGTACTCCTCAGTTTATGGTGCTTCCTCTTTTACTGAAAGATCAGAACGAGAAGGTGAATCAGCTCAGAGGTGTAGGGCTAGACTGGAGAGGTATCGTCGAACAGCTGAACGTGCAGCAAAAGCTTTGGAAGAAAAGAACATGCGCGACCTTGTAGCTCAGAAGGAGCAAGCTGAGAGAAATAGATTAGCAGAAACCCTGGATATTGAAGTCAGGAGGTGGTCAAGTGGAAAAGAAGGAAATTTGCGTGCATTGCTTTCAACCTTGCAATATATTCTTGGGCCTGACAGTGGGTGGCAGCCAATCCCACTGACGGACGTCATTACTTCGGCTGCTGTAAAGAAAGCCTACAGGAAGGCCACCCTTTGTGTCCATCCCGACAAATTACAGCAACGTGGAGCAAGTATTCAACACAAATACATTTGTGAAAAAGTCTTTGATCTCCTAAAGGAAGCTTGGAACAAATTCAACTCAGAAGAGCGATAG	4281	0.4366	MESLAHSRQPNKFPVTVSKKITGAAGGPGFPAETLYDHVYGGATRFAGGHSLSPRFEDYGEIFASFHAPRASAIPVLDLPSLDDGEVFFDFRNVACEYSEIFRGCEGLDFLLSYEDLFRDGVSEEDDGDDAEEEEAWTPVETDSFSGDLDHFGINEGMPNGDHLRSSDGISEFNVLYHKVNGTGNEALSKGKSHTSQLRATPEFPHVFDETTHFHRTDPSLQVVDDVDLDMEFNASQARRNHLREMESHPINFTSGEQVFGSDLDLHNECCRNGSHSCETFITVSHISLRTLPSQVPPPSRPPPVLDAKQEYTNGFHSNKEGVDFEETLGDTSPPFLDVEVDTNSSAAAIKEVMHRPEAKLRSAKELKERKKEFSESNVDSNYDAKVNEAKTAVNITKLDSLNDEGVQRIGKKKISSTDGGQKTRKAAPETPELLEGERLLNMFDETHIKESRSSQESDRRTGIGMWKEATEFFELVGTEESGKVITPTNHGDTKKLVHDTRANEYGKKEKEVFNVKAEYKKVKEVEGSQQEGCKEKYKAGNGAHEQRKNIKKSKLSKEECRQREHVKNEEMAEIFELEKSEKERMVETQRKEHKQVEIEKSKEVDREMLSEVQWSTKHMESEKKRKEDEQLQLSMKRHEQSQRMKENGKIQREASALGGVKSEQRVKDSVKLEKFERSNEAINLASRKENMTCKIEDEIILEATQIQNKKKLKETCENEEIGKSRKGSFTIEENDECLKHALEQVKNEKGLKQDFELEMNEERSRVTFELGENEPCERDQGKEKLSEICDGYRKGNRVKDVGDSIWLQNVLKQAPELQMNIGNETRGKKEIDCPSDLACDCEGTVDISRADSHSQKRERMLKDADKDGKDKGLDKALEQTEGNGEGIHLNFAKETNEERKTESDDNLLAAHSCSIHEENICIQELRQDPIADQEIGKSVTDCKVGENKLEEVWLENLKDTGKKGAFEMSRGEVEHSGKVTCTSTNVNVNEHSFNSEQACTEETKTAPQMSSSQANLCGDYGRNTVADEPATVQEAVNIQKPSQRAHVLNSTKSKDRSLDEISSSKEKDVERIRRERELEKDRFRKIEEEMERERERQKDRMAVDTAVLEAERERERGKDRMAVDKATLEARDRTYAEARERAERAAFERATAEARQRILAEARERLEKACAEARDKTYADKAASEARLKAQRTAVERATAEARERAMEKVKVERAASESRERLGRSVSDKFSVSSRNGGRQGSSSSDILDPFCQNSSSSTHSRYPYSSVYGASSFTERSEREGESAQRCRARLERYRRTAERAAKALEEKNMRDLVAQKEQAERNRLAETLDIEVRRWSSGKEGNLRALLSTLQYILGPDSGWQPIPLTDVITSAAVKKAYRKATLCVHPDKLQQRGASIQHKYICEKVFDLLKEAWNKFNSEER*	1427

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phac3g04015	1426	MobiDBLite	consensus disorder prediction	851	873	-	-
	Phac3g04015	1426	Coils	Coil	1287	1326	-	-
	Phac3g04015	1426	Coils	Coil	580	600	-	-
	Phac3g04015	1426	MobiDBLite	consensus disorder prediction	1205	1267	-	-
	Phac3g04015	1426	Coils	Coil	1182	1202	-	-
	Phac3g04015	1426	Coils	Coil	1136	1177	-	-
	Phac3g04015	1426	MobiDBLite	consensus disorder prediction	1042	1072	-	-
	Phac3g04015	1426	SUPERFAMILY	Chaperone J-domain	1270	1425	IPR036869	-
	Phac3g04015	1426	Gene3D	DnaJ domain	1300	1426	IPR036869	-
	Phac3g04015	1426	MobiDBLite	consensus disorder prediction	583	651	-	-
	Phac3g04015	1426	MobiDBLite	consensus disorder prediction	1229	1267	-	-
	Phac3g04015	1426	MobiDBLite	consensus disorder prediction	1050	1072	-	-
	Phac3g04015	1426	Coils	Coil	1070	1101	-	-
	Phac3g04015	1426	MobiDBLite	consensus disorder prediction	583	664	-	-
	Phac3g04015	1426	FunFam	Auxilin-related protein 1	1297	1426	-	-
	Phac3g04015	1426	MobiDBLite	consensus disorder prediction	531	566	-	-
	Phac3g04015	1426	ProSiteProfiles	dnaJ domain profile.	1362	1426	IPR001623	-
	Phac3g04015	1426	MobiDBLite	consensus disorder prediction	1205	1228	-	-
	Phac3g04015	1426	PANTHER	AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED	15	1426	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phac3g04015	Phac-Chr3	39675120	39682359	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Phac3g04015	-		-	pvu:PHAVU_003G255200g	2625.51

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Phac3g04015	3	39675120	39682359	Phac3g04015	3	39675120	39682359	ECH