Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g04003 ATGAGTTTCAGGGAAGAGGCTGGAGATGCAAGGGATCTTCAGAAACCGTTTCTCCACACGGGGAGTTGGTACAAGATGGGTTCGAGGCAGTCCAGCATCATGGGATCCTCTACTCAGGTCATCCGCGATGGCGCTGTCTCTGTCCTCTTCTGCGTCCTCATCGTCGCTTTGGGTCCTATCCAATTCGGCTTCACATGCGGGTATTCTTCTCCAACGCAAGGGGCTATAGTACGCGATCTAAAGCTCTCAGTTTCGGAGTTCTCTTTGTTTGGATCTTTGTCGAATGTGGGAGCGATGGTGGGGGCTATAGCAAGTGGTCAGATAGCTGAATACATAGGGCGCAAAGGGTCGTTGATGATTGCTGCAATTCCCAATATAATAGGGTGGCTTTCTATTTCTTTTGCCAAAGATTCCTCGTTTTTGTTTATGGGGAGGTTGTTGGAAGGTTTCGGCGTTGGGATCATCTCTTATGTGGTTCCTGTATATATAGCTGAGATTGCTCCTCAAAACATGAGAGGTGGCCTTGGATCAGTGAACCAGCTCTCTGTTACAATTGGCATTCTGCTGGCTTATCTGTTGGGCCTTTTTGTCAACTGGAGAGTGCTTGCAATTTTAGGAGTTTTGCCTTGTACAGTATTAATACCTGGGTTATTTTTCATACCAGAATCCCCCAGATGGTTGGCCAAGATGGGGATGACAGATGAATTTGAGACTTCTTTGCAAGTGTTAAGAGGATTTGACACCGACATATCTGTGGAAGTTTATGAAATTAAGAGATCTGTGGCTTCAACAGGAAAAAGAGCTGCAATCCGATTTGCAGATCTCAAGAGGAAAAGATATTGGTTTCCCTTAATGGTTGGTATTGGATTACTTGTTCTTCAGCAACTATCTGGCATCAATGGAGTTTTGTTCTATTCAACTACCATCTTTGCAAACGCAGGAATTTCGTCAAGCGATGCTGCTACAGTTGGACTTGGTGCCATTCAGGTCATAGCAACTGGAATTTCCACGTGGCTGGTGGACAAAAGTGGTCGGAGGCTGCTTTTAATAGTGAGTATGAAGCAAACTTCATTCTGTCATAACCGTTTTCTAATATCTACTACACTAAAATATGGTTATTAA 1122 0.4439 MSFREEAGDARDLQKPFLHTGSWYKMGSRQSSIMGSSTQVIRDGAVSVLFCVLIVALGPIQFGFTCGYSSPTQGAIVRDLKLSVSEFSLFGSLSNVGAMVGAIASGQIAEYIGRKGSLMIAAIPNIIGWLSISFAKDSSFLFMGRLLEGFGVGIISYVVPVYIAEIAPQNMRGGLGSVNQLSVTIGILLAYLLGLFVNWRVLAILGVLPCTVLIPGLFFIPESPRWLAKMGMTDEFETSLQVLRGFDTDISVEVYEIKRSVASTGKRAAIRFADLKRKRYWFPLMVGIGLLVLQQLSGINGVLFYSTTIFANAGISSSDAATVGLGAIQVIATGISTWLVDKSGRRLLLIVSMKQTSFCHNRFLISTTLKYGY* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g04003 373 Pfam Sugar (and other) transporter 52 359 IPR005828 GO:0016020|GO:0022857|GO:0055085
Phac3g04003 373 CDD MFS_GLUT6_8_Class3_like 49 353 IPR044775 GO:0008643|GO:0051119
Phac3g04003 373 SUPERFAMILY MFS general substrate transporter 50 353 IPR036259 -
Phac3g04003 373 Gene3D MFS general substrate transporter like domains 43 373 IPR036259 -
Phac3g04003 373 ProSitePatterns Sugar transport proteins signature 1. 105 122 IPR005829 GO:0016020|GO:0022857|GO:0055085
Phac3g04003 373 FunFam facilitated trehalose transporter Tret1 44 370 - -
Phac3g04003 373 PANTHER - 42 360 - -
Phac3g04003 373 ProSitePatterns Sugar transport proteins signature 2. 147 172 IPR005829 GO:0016020|GO:0022857|GO:0055085
Phac3g04003 373 PRINTS Sugar transporter signature 294 304 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phac3g04003 373 PRINTS Sugar transporter signature 59 69 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phac3g04003 373 PRINTS Sugar transporter signature 142 161 IPR003663 GO:0016020|GO:0022857|GO:0055085
Phac3g04003 373 ProSiteProfiles Major facilitator superfamily (MFS) profile. 51 373 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g04003 Phac-Chr3 39558575 39563910 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g04003 1 352 Organic Solute Cotransporters AT1G75220 83.569 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g04003 K03444 - gmx:100813399 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g04003 3 39558575 39563910 Phac3g04003 3 39558575 39563910 ECH