Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03987 ATGTTCCTTCTTAGAAAGCAAGGCCAGAATCAGCTGGAGATTGATTCCTCAAAACAAGATACAAAGGTGAATGAACTCAGGGCTGCTCTTGGGTCCCTCTCTGGTCGTCGACTACTGTATTGCACAGATGCATGTCTAAGGAGATATTTAGAAGCAAGGAATTGGAATGTTGATAAAGCAAAAAAAATGCTGGAGGAAACACTCAAGTGGAGGGCAACTTATAGGCCAGAAGAAATCCGTTGGGCTGAAGTAGCACATGAGGGTGAGACAGGTAAAGTCTCCAGGGCTAACTTTCATGATCGACATGGGAGAACTGTGCTTATTTTGAGGCCAGGAATGCAGAACACAAATTCAGCTGAAGATAATATCAGGCATTTAGTTTATCTATTGGAAAATGCTATCCTAAATCTTTCCGAAGGTCAAGAACAAATGTCGTGGTTGATAGACTACACAGGATTATCACTTAATACGAATATGTCTCTTAAAACAGCTCGTGATATTATTCACATTTTACAAAACCACTATCCAGAAAGGCTTGCTATTGCTTTTCTGTACAATCCACCAAGAATATTTCAGGCTTTCTGGAAGGCCGTCAAGTTCTTCCTGGACCCCAAGACAGTCCAGAAGGTGAAGTTTGTTTATCCCAATAATAAGGAGAGTGTGGAGCTAATGCAATCACTCTTCGACCTAGATAACCTTCCAAGTGAATTTGGGGGGAAAACAAGTTTAATGTATGATCACGAAGAGTTCTCACGGTTGATGACTGAGGATGATGTGAAAACTGCAAAGTTCTGGGGACTTGACGAGAAGCCTTTCAACCCTCCTAAGAAAGGCCATGCTGGAGCAGAGGTGGCACCAGAACCCGTGTCTGTTCAGACAGTAGTTAGTTAG 891 0.4242 MFLLRKQGQNQLEIDSSKQDTKVNELRAALGSLSGRRLLYCTDACLRRYLEARNWNVDKAKKMLEETLKWRATYRPEEIRWAEVAHEGETGKVSRANFHDRHGRTVLILRPGMQNTNSAEDNIRHLVYLLENAILNLSEGQEQMSWLIDYTGLSLNTNMSLKTARDIIHILQNHYPERLAIAFLYNPPRIFQAFWKAVKFFLDPKTVQKVKFVYPNNKESVELMQSLFDLDNLPSEFGGKTSLMYDHEEFSRLMTEDDVKTAKFWGLDEKPFNPPKKGHAGAEVAPEPVSVQTVVS* 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03987 296 Pfam CRAL/TRIO domain 93 239 IPR001251 -
Phac3g03987 296 Gene3D - 3 270 IPR036865 -
Phac3g03987 296 SMART CRAL_TRIO_N_2 42 67 IPR011074 -
Phac3g03987 296 SMART sec14_4 87 242 IPR001251 -
Phac3g03987 296 PRINTS Cellular retinaldehyde-binding protein signature 45 67 - -
Phac3g03987 296 PRINTS Cellular retinaldehyde-binding protein signature 162 183 - -
Phac3g03987 296 PRINTS Cellular retinaldehyde-binding protein signature 231 240 - -
Phac3g03987 296 CDD SEC14 99 240 IPR001251 -
Phac3g03987 296 FunFam Phosphatidylinositol transfer protein 3 3 273 - -
Phac3g03987 296 Pfam CRAL/TRIO, N-terminal domain 42 66 IPR011074 -
Phac3g03987 296 MobiDBLite consensus disorder prediction 274 296 - -
Phac3g03987 296 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 81 245 IPR001251 -
Phac3g03987 296 SUPERFAMILY CRAL/TRIO domain 82 257 IPR036865 -
Phac3g03987 296 SUPERFAMILY CRAL/TRIO N-terminal domain 9 82 IPR036273 -
Phac3g03987 296 PANTHER GH16843P 10 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03987 Phac-Chr3 39495947 39500244 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03987 46 234 Acyl Lipid Metabolism Gene Families AT5G47730 25.238 2.66e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03987 K26544 - gmx:100782334 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g03987 3 39495947 39500244 Phac3g03987 3 39495947 39500244 ECH