Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03984 ATGGAACATTACACCGTTTCCAAGCAGCTTCAACAATTTTGGCCACGGGGCTATGGTAGAGCATATTTTTCTGCCACCTCAGCACATACATGTACTGGAGATGGCAATGCCATGGTTGCACGTGCTGGGATCCCACTTGAGGATTTAGAATTTGTGCAATTTCACCCTACAGGCATATATGGAGCGGGCTGCCTTATCACGGAAGGTTCTCGAGGTGAAGGCGGGATTCTTAGGAACAGTGAGGGCGAGAGGTTTATGGAACATTATGCTCCTACTGCAAAGGATCTTGCATCAAGAGATGTTGTTTCCAGATCAATGACTATGGAAATCCGGGAAGGCCGTGGTGTAGGCCCCCAGAAGAAATATCACATCTATCTCCACTTGAATCACTTACCCCCAGATGTTCTCAAGGAGAGACTACCTGGTATCTCTGAAACAGCTGCTATTTTTTCTGGCGTGGATGTTACTAAGGAGCCTATTCCTGTTTTGCCAACAGTGCATTATAACATGGGTGGTATTCCCACGAATCATCATGGAGAGGTGATTACTATTAAAGGTGATGATCCAGATGCGATAGTTCCTGGATTAATGGCTGCGGGGGAAACAGCATGTGCTTTTACCATCTCTAAGTGTTCTTGCCGTTGCCGTTCCTGTGTGGAGTTCTTGGCATTCGGATTTAAAGAATGA 687 0.4614 MEHYTVSKQLQQFWPRGYGRAYFSATSAHTCTGDGNAMVARAGIPLEDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMEHYAPTAKDLASRDVVSRSMTMEIREGRGVGPQKKYHIYLHLNHLPPDVLKERLPGISETAAIFSGVDVTKEPIPVLPTVHYNMGGIPTNHHGEVITIKGDDPDAIVPGLMAAGETACAFTISKCSCRCRSCVEFLAFGFKE* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03984 228 Gene3D - 16 90 IPR036188 -
Phac3g03984 228 Gene3D - 160 226 IPR036188 -
Phac3g03984 228 PANTHER SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT 17 205 IPR030664 -
Phac3g03984 228 FunFam Mitochondrial succinate dehydrogenase flavoprotein subunit 59 163 - -
Phac3g03984 228 Pfam FAD binding domain 17 205 IPR003953 -
Phac3g03984 228 Gene3D Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 91 159 IPR027477 -
Phac3g03984 228 SUPERFAMILY FAD/NAD(P)-binding domain 13 205 IPR036188 -
Phac3g03984 228 SUPERFAMILY Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 49 168 IPR027477 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03984 Phac-Chr3 39480840 39486686 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03984 K00234 - gmx:100802169 376.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g03984 3 39480840 39486686 Phac3g03984 3 39480840 39486686 ECH
Phac2g02537 2 26644428 26651029 Phac3g03984 3 39480840 39486686 PCT