Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03959 ATGAGTGCCCTTAATTTCAACCCATGGCTACAACCCAGCTTCACCAGATCCAGATCCCCAACTTTTCTATTTCATTGCCTCACAAACTTCCCCATTCGCATTCCCAAACGCCCCAGAGATAAGCCTTATTCAACCACCACGACTTTCACGCTATCCGCACTCCTCACCAAAGAGGAGACGCTTCAGACGGAAGAAAAGCCGGCGTTCGATTTCAAGTCCTACATGCTCCACCAAGCCGACGCCGTCAACCAGGCGCTCCACGACGCCGTTCCGCTCCGCGAGCCGCTGCGGATCCACGAGGCCATGCGCTACTCCCTCCTCGCCGGGGGTAAGCGCGTGCGCCCCGTCCTCTGCGTCGCCGCCTGCGAGCTTGTCGGCGGCTCCGCCGCCACCGCGATGCCCGCTGCCTGCGCCGTCGAGATGATCCACACCATGTCCCTCATCCACGATGACCTCCCCTGCATGGACAACGACGACCTCCGCCGCGGTAAGCCTACCAACCACAAGGTCTTCGGAGAGGACGTGGCAGTCCTCGCCGGCGACGCGCTCCTCGCATTCGCCTTCGAGCACATCGCCTGCGCTACCGTTGGTGCCTCCCCGCCGCGCATCGTCCGTGCCCTCGGTGAGCTCGCGCGCGCCATCGGCGCTGAGGGACTCGTCGCCGGCCAGGTGGTCGACATCAAATCCGAGGGGCTTGACAACGTCGGCCTCGAACGCTTGGAGTTCATCCATATCCACAAGACCGCAGCCCTGCTGGAGGGCGCGGTGGTCCTCGGCGCCATCCTGGGCGGTGGAACCGACGAGGAGATTGAGAAATTGAGGAAGTTCGCGCGGTATATAGGATTGCTGTTTCAGGTGGTTGATGACATTCTGGATGTTACGAAGTCTTCCCAGGAATTGGGGAAAACTGCGGGGAAGGATCTTACCGCTGATAAGGTTACTTATCCCAAGCTTTTGGGGATTGAGAAGTCTAAGGAGTTTGCTGCCAAATTGAACAAAGATGCTCATGATCAGCTTTCTGGCTTTGACCCTGTCAAGGCTGCTCCTTTAGTTGCTTTATCCAATTACATTGCTCATAGGCAGAACTAG 1089 0.584 MSALNFNPWLQPSFTRSRSPTFLFHCLTNFPIRIPKRPRDKPYSTTTTFTLSALLTKEETLQTEEKPAFDFKSYMLHQADAVNQALHDAVPLREPLRIHEAMRYSLLAGGKRVRPVLCVAACELVGGSAATAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIACATVGASPPRIVRALGELARAIGAEGLVAGQVVDIKSEGLDNVGLERLEFIHIHKTAALLEGAVVLGAILGGGTDEEIEKLRKFARYIGLLFQVVDDILDVTKSSQELGKTAGKDLTADKVTYPKLLGIEKSKEFAAKLNKDAHDQLSGFDPVKAAPLVALSNYIAHRQN* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03959 362 FunFam Geranylgeranyl diphosphate synthase 68 362 - -
Phac3g03959 362 CDD Trans_IPPS_HT 94 360 IPR000092 GO:0008299
Phac3g03959 362 Pfam Polyprenyl synthetase 98 331 IPR000092 GO:0008299
Phac3g03959 362 Gene3D Farnesyl Diphosphate Synthase 63 362 IPR008949 -
Phac3g03959 362 SUPERFAMILY Terpenoid synthases 72 342 IPR008949 -
Phac3g03959 362 ProSitePatterns Polyprenyl synthases signature 1. 147 163 IPR033749 -
Phac3g03959 362 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 56 362 - -
Phac3g03959 362 SFLD Polyprenyl Transferase Like 74 360 - -
Phac3g03959 362 ProSitePatterns Polyprenyl synthases signature 2. 280 292 IPR033749 -
Phac3g03959 362 SFLD Isoprenoid Synthase Type I 74 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03959 Phac-Chr3 39242407 39244585 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03959 K13789 - gmx:100785539 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g03959 3 39242407 39244585 Phac3g03959 3 39242407 39244585 ECH
Phac3g03959 3 39242407 39244585 Phac2g02481 2 26236759 26238147 ECH
Phac2g02481 2 26236759 26238147 Phac3g03959 3 39242407 39244585 PCT