Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phac3g03402 | ATGGAGGAAGCCCTTGCGGAGCTGGAGCGAGTCCAAACTCAGCTCTTGCAACGCATATCCAAACTCCAGCATTCCCATCTTCCGTCATCGCCTTCTCAAAACGACACCGTTGACGACGCCGGCACCGACACCGACACCGTATCTCGCCTCTCCTCCATTTTGCGCACCAACGGCGTTCCCGAATTCTCCTTTAAGAGAGTCCCTTCTGATTACTACGATTGGCCTCTCGAAGCCCGTCGCGACGCCCTCTCCGCCGCCTCAATCCACCATCTCTGCAAAAGCATCGTTCTCGTTAATACGCAAGCCCCCGCTAACGTCGTCGATTGCACCAACCGCAATAATTCCAAGTATTACGTCGTTGTCGTTCAGGTTCGCACTCTCTTCCTCTCGCTACTTCCTTACTTAATTCTCTCACTGCTTGCTTATTCGTTTGTTTCGCAGTACACTGCTCGCTTCAACGCCGACGCTGTCAAGAATTTTCTGTATTCGCTCAACAATGGAAGTATTGCGAAGAAGAAATTCAACATGAGGCTAGCTCCTGAGGAGACATCAATGGAATTAACTGGATATGGGCACAATGCAGTAACTTGTATTGGCATGAAAACAGACATTCCGGTGATCTTGGATGAGGCAATTGTAAAGCTAACTCCAGATTTCTTTTGGTTGGGTGGTGGTGAGGTTGATCTTAAGCTAGGGATCCGAACATCTCAATTGATCAAATTTATCAACCCATTCATTGTCCAATGTAGCAATAATTGA | 759 | 0.4809 | MEEALAELERVQTQLLQRISKLQHSHLPSSPSQNDTVDDAGTDTDTVSRLSSILRTNGVPEFSFKRVPSDYYDWPLEARRDALSAASIHHLCKSIVLVNTQAPANVVDCTNRNNSKYYVVVVQVRTLFLSLLPYLILSLLAYSFVSQYTARFNADAVKNFLYSLNNGSIAKKKFNMRLAPEETSMELTGYGHNAVTCIGMKTDIPVILDEAIVKLTPDFFWLGGGEVDLKLGIRTSQLIKFINPFIVQCSNN* | 253 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phac3g03402 | 252 | MobiDBLite | consensus disorder prediction | 23 | 42 | - | - | |
| Phac3g03402 | 252 | Coils | Coil | 5 | 25 | - | - | |
| Phac3g03402 | 252 | Gene3D | - | 135 | 251 | IPR036754 | GO:0002161 | |
| Phac3g03402 | 252 | Pfam | Aminoacyl-tRNA editing domain | 175 | 241 | IPR007214 | GO:0002161 | |
| Phac3g03402 | 252 | CDD | YbaK_like | 77 | 247 | - | - | |
| Phac3g03402 | 252 | PANTHER | UNCHARACTERIZED | 36 | 125 | - | - | |
| Phac3g03402 | 252 | SUPERFAMILY | YbaK/ProRS associated domain | 145 | 249 | IPR036754 | GO:0002161 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phac3g03402 | Phac-Chr3 | 34560077 | 34564230 | Tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Phac3g03402 | - | - | var:108338253 | 410.609 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Phac3g03402 | 3 | 34560077 | 34564230 | Phac3g03402 | 3 | 34560077 | 34564230 | ECH |