Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03266 ATGGCAAGGCCTAATCAAGAGGCGGTTGAGACTTTCGTCAGCATCACTGGCTTGCCTGAGGCAGTAGCGCTGCAAAAACTCGAGGAACATGGTGGTAATCTCAATCAAGCAGTCAATGCACATTTTAGTGAAGGAGACAGAAACCTAACGACTGGCTCTCACAACAGCTCTACAGCATTTCCTCAAGAGGATTTCATGGATATAGATGATCAACACGATGCAGATATTCATAGAATTCCATCACTTCCAGCTTTAGCACCAAATCTCAATCCATTTTCTCTTCTTGATTCCACTATTGGGAGAGGTATGTTTGGTACTCCTCTTGATCCGGCAGTCCAGGCACCATTTGTTACACATCCTAGAGAGGTAAGGGAGATTCCTATAGAGGTTAAGGATGGTAACGAATCCACTACTCAGTCTGGTCGTGTTCCATCTATTGAAGATGTCACTGGAACTGTTGATACCCATGGTCCAGATATCCATGGGACTGTCATAATCAATGATGAAGATGATGACAATGCTCCACCTGCCCAGATTGCGCATCGACATGAGCAAAATGATAAGATATTGGCTGATACTTCACTCAATAGCAGTGCTAGACCTAGTGCTCCTGAATCTGAGAATTTACCAGATTATGGCAATGAGATAGAAGAAGAAATGCTTCGGGCAGCCATTGAGGCTTCTAAACGGGAGGCTGAGGAAAATTACAGAAATCACAAACTTGGCAGACAAACTGACTCAAGTGAATCAGGATCACAGTCAAGGCAATCTTATTTGGAGGATCCTGAGCTTGCCCATGCAGTTTCATTGTCCCTGAAGACAGCTGAGCAAGAAAAAGCATGGCGTGTACAGGGAGGAGATTCTGAATCTGCACCAGCAGGGCCATCTAAGTCATCAGAGGCTGGACTAGGGGAAGTGGCATCTAATGGAAGGTTGCAGGCAGGAAGCTTGTCCTTTCATGATGAAGCTGAAGATGTAGAGGAGCAGCCCCTCGTTAGAAACAGGTCTAGACATATGTCTTCAGGATCCACAGGATCAGTCAAAGATGTTGAATTTGCTGAGGCTAGCACACTACCAAGCACAGCACCACAGGAGACCAGTAATCCTCCTCCTAATAGAAATTCCTTTCCCTCTGAGGAGTGGGGTGGCATATCTTCAGAGGAACATGATGAAGCAGTAATGCTTGAAGCTGCAATGTTTGGTGGAATCCCGGAAGGGACTGGATATCAGTATGCTTATGCACCACATGAGTTTATGCAAGGTAGGGGGTCTAATCCTCGTGCCCCATATCGCCCACCTTCACCATCACTGGCAGCACAGCGTCTGATAAGGGAACAGCAGGATGATGAATATCTCGCATCATTACAAGCAGACAGAGAAAGAGAATTGAAGGAAGCCGAGGCTGCTCGTGAAGAGGAAAGACGGATAGCAGAAGAATCCCGCAGGAAATTACAGGAAGAGCAGGAATTGGAAACACAGTTAGCCGCCAAAGAAGTTTCTCTGCCACCAGAACCATCATCAGATGATGATAACGCTGTTAACTTGCTGGTAAAAATGCCAGATGGCAACCGTCGTGGACGCCGATTCCTAAGATCTAATAGACTACAGTCTCTGTTCGACTTCATAGATATCGGTAGGATGGTGAAACCAGGCAGTTACAGACTGGTGAGACCATATCCTAGGCGTGCCTTTAGTGATGGAGAAAGTGCTGCGAGCCTGGCTGAACTTGGCCTAACCAACAAGCAAGAAGCTTTGTTTTTGGAGTTAATCTGA 1773 0.4619 MARPNQEAVETFVSITGLPEAVALQKLEEHGGNLNQAVNAHFSEGDRNLTTGSHNSSTAFPQEDFMDIDDQHDADIHRIPSLPALAPNLNPFSLLDSTIGRGMFGTPLDPAVQAPFVTHPREVREIPIEVKDGNESTTQSGRVPSIEDVTGTVDTHGPDIHGTVIINDEDDDNAPPAQIAHRHEQNDKILADTSLNSSARPSAPESENLPDYGNEIEEEMLRAAIEASKREAEENYRNHKLGRQTDSSESGSQSRQSYLEDPELAHAVSLSLKTAEQEKAWRVQGGDSESAPAGPSKSSEAGLGEVASNGRLQAGSLSFHDEAEDVEEQPLVRNRSRHMSSGSTGSVKDVEFAEASTLPSTAPQETSNPPPNRNSFPSEEWGGISSEEHDEAVMLEAAMFGGIPEGTGYQYAYAPHEFMQGRGSNPRAPYRPPSPSLAAQRLIREQQDDEYLASLQADRERELKEAEAAREEERRIAEESRRKLQEEQELETQLAAKEVSLPPEPSSDDDNAVNLLVKMPDGNRRGRRFLRSNRLQSLFDFIDIGRMVKPGSYRLVRPYPRRAFSDGESAASLAELGLTNKQEALFLELI* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03266 590 Coils Coil 452 497 - -
Phac3g03266 590 MobiDBLite consensus disorder prediction 462 490 - -
Phac3g03266 590 MobiDBLite consensus disorder prediction 230 244 - -
Phac3g03266 590 ProSiteProfiles UBX domain profile. 508 586 IPR001012 GO:0005515
Phac3g03266 590 MobiDBLite consensus disorder prediction 419 438 - -
Phac3g03266 590 Pfam UBX domain 509 588 IPR001012 GO:0005515
Phac3g03266 590 Gene3D - 213 284 - -
Phac3g03266 590 SUPERFAMILY UBA-like 2 44 IPR009060 GO:0005515
Phac3g03266 590 Pfam UBA-like domain 6 46 - -
Phac3g03266 590 MobiDBLite consensus disorder prediction 279 390 - -
Phac3g03266 590 MobiDBLite consensus disorder prediction 245 259 - -
Phac3g03266 590 MobiDBLite consensus disorder prediction 357 381 - -
Phac3g03266 590 Gene3D - 509 589 - -
Phac3g03266 590 CDD UBX 514 588 - -
Phac3g03266 590 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 217 235 IPR003903 -
Phac3g03266 590 PANTHER FAS-ASSOCIATED PROTEIN 11 589 - -
Phac3g03266 590 CDD UBA_Ubx1_like 6 42 - -
Phac3g03266 590 MobiDBLite consensus disorder prediction 230 260 - -
Phac3g03266 590 SMART ubx_3 505 589 IPR001012 GO:0005515
Phac3g03266 590 SMART uim 216 235 IPR003903 -
Phac3g03266 590 SMART uim 259 278 IPR003903 -
Phac3g03266 590 SUPERFAMILY Ubiquitin-like 471 586 IPR029071 -
Phac3g03266 590 MobiDBLite consensus disorder prediction 133 158 - -
Phac3g03266 590 Gene3D - 1 45 - -
Phac3g03266 590 MobiDBLite consensus disorder prediction 318 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03266 Phac-Chr3 33515308 33519754 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03266 - - vum:124835115 976.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g03266 3 33515308 33519754 Phac3g03266 3 33515308 33519754 ECH