Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03130 ATGAAGGCAACACTACGGTACTTAGCAGGCATTGCTGGCCCAAGTGGTTTCGGCTCAAATTCAACAGCTGAGCAAGTTACTGAAGATTTCTCTTCCTTGCTCCCTTCAAATCTAACCGCTCTCATCACTGGTGCGACTTCTGGAATTGGAGCTGAAACAGCTAGAGTGTTTGCAAAAAGAGGTGTAAGGGTTGTGATTGGTGCGAGGGACTTAAGAAAGGCGAGGGAAGTGAGAGAGAAAATCCAAAAGGAGAGTCCTAATGCTGAGGTTATTCTGTTAGAGATCGATCTTAGCTCTTTTGCTTCTGTACAGAGATTTTGCTCAGAGTTTTTAGCTTTAGAATTGCCCCTTAATATTCTCATAAACAATGCAGGAATGTACTCTCAAAACTTGGAGTTCTCTGAAGAAAAACTTGAAATGACATTTGCTACAAATTACTTAGGACATTTTTTGTTAACGAAAATGCTGCTAGAGAAAATGATAGATACTGCAAAGAAGTCAGGCATTGAAGGAAGAATAATAAACGTTTCTTCGGTGCTTCACAGCTGGGTGAAAAGATCAGCGTTTTGTTTCAACGACATGCTCTGCGGAAAAAATTATAATGGCACACGCGCATACGCTCAGTCAAAATTGGCAACAATTCTGCATGTCAAGGAAGTGGCAAGACAACTTAAGGAAAGGAATGCAAATGTAACAATTAACGCAGTGCATCCAGGAATTGTGAAGACGGGAATTATTAGAGCACATAAGGGCTTAATAACGGATTCCCTGTTTTTCATTGCATCAAAGTTACTGAAATCGATATCACAGGTTTGTAAATATTTTAGGGCTTAA 834 0.4005 MKATLRYLAGIAGPSGFGSNSTAEQVTEDFSSLLPSNLTALITGATSGIGAETARVFAKRGVRVVIGARDLRKAREVREKIQKESPNAEVILLEIDLSSFASVQRFCSEFLALELPLNILINNAGMYSQNLEFSEEKLEMTFATNYLGHFLLTKMLLEKMIDTAKKSGIEGRIINVSSVLHSWVKRSAFCFNDMLCGKNYNGTRAYAQSKLATILHVKEVARQLKERNANVTINAVHPGIVKTGIIRAHKGLITDSLFFIASKLLKSISQVCKYFRA* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03130 277 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 206 225 IPR002347 -
Phac3g03130 277 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 115 126 IPR002347 -
Phac3g03130 277 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 171 179 IPR002347 -
Phac3g03130 277 PANTHER RETINOL DEHYDROGENASE 14 270 - -
Phac3g03130 277 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 37 252 IPR036291 -
Phac3g03130 277 PRINTS Glucose/ribitol dehydrogenase family signature 206 225 IPR002347 -
Phac3g03130 277 PRINTS Glucose/ribitol dehydrogenase family signature 165 181 IPR002347 -
Phac3g03130 277 PRINTS Glucose/ribitol dehydrogenase family signature 39 56 IPR002347 -
Phac3g03130 277 PRINTS Glucose/ribitol dehydrogenase family signature 229 246 IPR002347 -
Phac3g03130 277 PRINTS Glucose/ribitol dehydrogenase family signature 115 126 IPR002347 -
Phac3g03130 277 Pfam short chain dehydrogenase 39 180 IPR002347 -
Phac3g03130 277 Gene3D - 35 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03130 Phac-Chr3 32306486 32309239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03130 19 248 Acyl Lipid Metabolism Gene Families AT1G63380 27.731 1.93e-14 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03130 - - gmx:100776567 497.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g03130 3 32306486 32309239 Phac3g03130 3 32306486 32309239 ECH