Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g03028 ATGTTTCCTCCTCGTCATTACACAACATGTCTTCTTCTTCTTCTCTTCCTCGTACTTTCCGACCTCTCCATATCCCAATCACAATCTCCTTCGGCTGCCAAGAGAAAACGCATGAAAGAGAAAGTTCGCAATATGTTTTACCACGCATATGACAACTATATGACATATGCCTTTCCGCATGATGAGCTTAAACCTCTCTCTAAGACTTTCACCAACTCCCTAAGTGAGTTGGGGAATTTGAAGCTTGAACACTTGCCTCAAGACTATCATGGCTCTGCCCTTACACTTATTGAATCGCTGTCTAGCCTTGTTATCATGGGAAATAGCACTGAATTTGAGAGAGCAGTGCTTTGGCTTTCACAAAATCTGACATTTGATGTTGATGCACGCATAAATCTTTTTGAGTGCAACATAAGAGTTCTGGGAGGACTTGTCTCAGCTCATTTACTTGCATCTGATTCTTCAAAGAAGTTGTTTCAAGGGGCTTACAACAATCAGCTGCTAGTTCTGGCTGAAGATTTAGGGAAACGCTTTCTACCAGCCTTTAATACGCCTACTGGATTGCCGTATGCATGGATTAACTTAAAGTATGGAGTAATGGAGAATGAGACTACAGAAACAAGTACTTCAGGGTGTGGTTCTCTAATTCTTGAAATGGGTGCTTTATCAAAAATGACTGGTGACCCCATATACGAATCAGCAGCTTTACGTGCTCTTCGCAAGCTATGGAGTATGCAGAGCTCATTAAAATTATTTGGAACCACACTGGACGTGGCAACTGGGCAATGGATTGAATATTCATCAGGAATTGGAGCTGGGGTTGATTCCTTCTATGAGTATCTACTCAAAGCCCATATCCTTTTTGGGAAGGAGGACTTTTGGAAAATGTTTCACTCTGCTTATGTTGCCGTGCAAAAATATTTCAGACACGGTTCTTGGTACCATGAAGCTGATATGAGGACTGGAAGAGCAACTTATTGGCAGCTTACAAGCCTTCAAGCATTTTGGCCTGGCCTACAGGTTCTTATTGGGGATCTTAGTGCTGCTAATTCATCTCACCGTGAGTTCTTCCATGTGTGGAAGAGATACGGAGTGCTACCAGAGAGGTCATCCTCTTCCAGTACTCAGCAATTGGCATGA 1140 0.4263 MFPPRHYTTCLLLLLFLVLSDLSISQSQSPSAAKRKRMKEKVRNMFYHAYDNYMTYAFPHDELKPLSKTFTNSLSELGNLKLEHLPQDYHGSALTLIESLSSLVIMGNSTEFERAVLWLSQNLTFDVDARINLFECNIRVLGGLVSAHLLASDSSKKLFQGAYNNQLLVLAEDLGKRFLPAFNTPTGLPYAWINLKYGVMENETTETSTSGCGSLILEMGALSKMTGDPIYESAALRALRKLWSMQSSLKLFGTTLDVATGQWIEYSSGIGAGVDSFYEYLLKAHILFGKEDFWKMFHSAYVAVQKYFRHGSWYHEADMRTGRATYWQLTSLQAFWPGLQVLIGDLSAANSSHREFFHVWKRYGVLPERSSSSSTQQLA* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g03028 379 Gene3D - 27 379 IPR012341 GO:0005975
Phac3g03028 379 PANTHER ER DEGRADATION-ENHANCING ALPHA-MANNOSIDASE-LIKE PROTEIN 2 8 371 IPR044674 GO:0004571|GO:1904380|GO:1904382
Phac3g03028 379 Pfam Glycosyl hydrolase family 47 45 374 IPR001382 GO:0004571|GO:0005509|GO:0016020
Phac3g03028 379 SUPERFAMILY Seven-hairpin glycosidases 35 373 IPR036026 GO:0004571|GO:0005509|GO:0016020
Phac3g03028 379 PRINTS Glycosyl hydrolase family 47 signature 130 148 IPR001382 GO:0004571|GO:0005509|GO:0016020
Phac3g03028 379 PRINTS Glycosyl hydrolase family 47 signature 180 199 IPR001382 GO:0004571|GO:0005509|GO:0016020
Phac3g03028 379 PRINTS Glycosyl hydrolase family 47 signature 45 65 IPR001382 GO:0004571|GO:0005509|GO:0016020
Phac3g03028 379 PRINTS Glycosyl hydrolase family 47 signature 328 344 IPR001382 GO:0004571|GO:0005509|GO:0016020
Phac3g03028 379 PRINTS Glycosyl hydrolase family 47 signature 271 288 IPR001382 GO:0004571|GO:0005509|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g03028 Phac-Chr3 31623768 31632829 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g03028 4 369 Glycoside Hydrolase AT1G27520 77.869 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g03028 K10084 - gmx:100793674 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g03028 3 31623768 31632829 Phac3g03028 3 31623768 31632829 ECH