Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02888 ATGGGGCAAGACAATCACCACAAGCGCAGCACCAGCGCCGGTTTACCCACCTCCAACGCCCGAGGCCGGGCCACCGCGCTACCCCGCGGCCGCCAGATCCAGAAGACCTTCAACAACATCAAGATCACTATCCTCTGCGGCTTCGTCACCATCCTCGTCCTCCGCGGCACCATCGGCGTCAACCTCGGCTCCTCCGAAGCCGAAGCCGTCAACCAGAACCTTGTCGAGGAGACCAACCGCATCCTCGCTGAGATCCGATCCGACGCCGACCCCAACGATCCCGACGACCAGCAACCCTTCAACCCCAACGCCACCTTCACCCTCGGCCCAAAAATCGATAATTGGGACCAAGAACGCCAAAATTGGCTCAGTCAAAACCCTGAATACCCTAATTCCATCAGAGGTAAACCTCGCATCTTGCTCCTCACTGGTTCCCCTCCCAAACCCTGTGATAACCCTATTGGAGATCACTACCTCTTGAAGTCCATTAAGAACAAGATTGATTACTGTAGATTACACGGGATTGAAATTGTGTACAATTTGGCTCATTTGGATGTGGAACTTGCTGGCTACTGGGCTAAGTTGCCCATGATTCGGAGGTTGATGTTGTCACATCCCGAGGTTGAGTGGATTTGGTGGATGGATAGTGATGCTTTTTTCACTGATATGGTGTTTGAGCTTCCTATGTCTAAGTACGATGCGTATAATTTGGTTCTTCATGGATACCCTGATTTGTTGTTTGACCAGAAGTCTTGGATTGCGGTGAATACTGGGAGTTTTCTGTTTAGGAACTGTCAGTGGTCTTTGGATTTACTTGATGATTGGGCTCCCATGGGCCCCAAGGGGCCCGTTCGCGAGGAGGCCGGCAAGATCTTGACGGCCAATCTCAAGGGGAGGCCGGCATTTGAGGCCGACGATCAGTCTGCATTGATATACTTGCTGCTGTCCAAGAAGGAGAAGTGGATGGATAAGGTGTTTCTTGAAAATTCCTTCTATTTGCACGGTTACTGGGCAGGGTTGGTTGATCGGTATGAAGAGATGATTGAGAAGTATCACCCCGGGTTGGGGGATGAGAGATGGCCGTTTGTGACACATTTTGTCGGGTGTAAACCCTGTGGGAGCTATGGAGATTATCCTGTGGAGAGGTGCCTCAGTAGCATGGAGAGGGCTTACAATTTTGCTGATAATCAGGTGCTTAAGCTCTATGGGTTCAGGCATCGTGGTCTGTTGAGCCCCAAGATCAAGAGGATCAGAAATGAGACTGTTACTCCTTTGGAGTTTGTAGACCAATTTGATATTCGGAGGCATTCTACGGAAAGCAAGGGATTGAAGAGCTAG 1338 0.5067 MGQDNHHKRSTSAGLPTSNARGRATALPRGRQIQKTFNNIKITILCGFVTILVLRGTIGVNLGSSEAEAVNQNLVEETNRILAEIRSDADPNDPDDQQPFNPNATFTLGPKIDNWDQERQNWLSQNPEYPNSIRGKPRILLLTGSPPKPCDNPIGDHYLLKSIKNKIDYCRLHGIEIVYNLAHLDVELAGYWAKLPMIRRLMLSHPEVEWIWWMDSDAFFTDMVFELPMSKYDAYNLVLHGYPDLLFDQKSWIAVNTGSFLFRNCQWSLDLLDDWAPMGPKGPVREEAGKILTANLKGRPAFEADDQSALIYLLLSKKEKWMDKVFLENSFYLHGYWAGLVDRYEEMIEKYHPGLGDERWPFVTHFVGCKPCGSYGDYPVERCLSSMERAYNFADNQVLKLYGFRHRGLLSPKIKRIRNETVTPLEFVDQFDIRRHSTESKGLKS* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02888 445 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 135 281 IPR029044 -
Phac3g02888 445 MobiDBLite consensus disorder prediction 1 26 - -
Phac3g02888 445 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 20 430 IPR008630 GO:0016020|GO:0016757
Phac3g02888 445 FunFam xyloglucan 6-xylosyltransferase 2 135 286 - -
Phac3g02888 445 Pfam galactosyl transferase GMA12/MNN10 family 136 374 IPR008630 GO:0016020|GO:0016757
Phac3g02888 445 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02888 Phac-Chr3 30626387 30628344 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02888 10 437 Glycosyltransferase AT5G07720 79.398 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02888 K08238 - gmx:100819400 861.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g02888 3 30626387 30628344 Phac3g02888 3 30626387 30628344 ECH