Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02789 ATGAGGTGGGAAAAGGTTGAGGTGAAGGCGATAGGCACAGAGGGTGGTGGAGGTGGGAATGAGGTGTATGGGCCAGGGAAGAGGTGGGGTCACACCTGCAACGCCGTCAAAGGTGGCAGACTTGTCTATGTCTTCGGTGGATACGGCAAAGATAACTGTCAGACCAACCAAGTTCATGTCTTTGACACTGTGAAGCAGACTTGGAGCCAACCTACTCTAAAAGGCTCCCCACCTACTCCTAGGGACAGCCACACTTGCACAGCCATTGGTGATAATCTGTTTGTGTTTGGGGGTACAGATGGGATGAACCCTCTCAAGGATTTGCACATATTAGACACTTCGTTGCATACATGGGTTTCTCCCACCATAAGAGGAGAAGGGCCACCAGCACGTGAGGGTCACAGTGCAGCAGTTGTTGGAAAACGCCTATTCATATTTGGTGGTTGTGGAAAATCAGCAGATAGTAATAATGAGGTCTACTACAACGATCTTTACATATTAAATACAGAGACATTTGTCTGGAAGTGTGCTACAACATCAGGCTCTCCACCATCTCCTCGTGATAGCCACTCTTGTTCATCTTGGAAAAATAAAATTATTGTAATAGGAGGTGAAGATGGACATGATTATTATTTGTCTGATGTCCATATCCTTGATACTGATACTTTAATCTGGAGGGAGCTGAGTGCATCAGGCCAATTGTTGCCTCCTCGCGCTGGTCATTCGACTGTTTCTTTTGGCAAGAACTTGTTCGTTTTTGGGGGATTTACTGATGCCCAAAATCTCTATAATGACCTTTATATGCTTGATATTGACACTGGTGTTTGGACAAATGTTACATCTGCAACCAGTGGTCCTTCTGCTAGATTTTCTGTGGCTGGTGACTGTTTAGACCCTTTCAAGGGGGGTGTTCTTGTATTCATAGGTGGTTGTAATAAAAGTCTTGAGGCCCTGGATGATATGTATTACCTATATACAGGTATTGCTCGAGAAAGTGAACAGAGACCAGAGAAGTTATCTTTAAGGAAGCAATTGAAACTGAAGTGCCAAGAACAAAATCCCAATCCTAGCCAAAATCAAGTTCTAGTAAGATATGGTGTGGGTTCTGATATGGGCCAGATCATGTCAGTGTTGAATTATAGCCAGCCAAGTAGGCTAAATATCCCAGTAAATCAATCCCTACCTCCTGGAAAGAAAATGTTTGAAGCCAAGGTCACCGAGAACATCTCAGAAGGATATACTATTGAAACTGTTATTGATGGAAAGCCTCTTCGTGGAATACTGTTTTTAAACAAGCCAAACTCTCTGTACTCAGCTGCTCAGACTCCCAGTAGGAAAAGGACTCTTGGTGAAATTGACGGTGTTGTCTCGAATGGTACACACTCTAACCAATTAAAGACTCCTAAATTACCTAAGCAAAACCAAATGGAAAACCAAGAAGCATTTTGTGGAGATAGTTCAGAATCTCATGAACACCGCCCTGAACCCATTCCAGTGGTAATGTCAAGTAACCCAATGACTGCCGATGCCTCTGATACCCATAAGGTTTCTGCCAACCCAGAACCAGAAGCTGCTGCTTTGAATCGGAATGATGAAAAACATGAAACACCCATATCCTTAAGTGGAAACTTGAAAAAAGCAAATGACGTGACAAGTTCCAAAGATGAGGTGCAAACAAATGATCAAACAAATGTGCTAATTTCCAACTTCGAAGTTACTAGACATGATACAAAATTTGATGCTCCAAATTACAACACTGAATTTCAGAAACCTGCTGCATCTGAGAGTGCTTTCTGCCTGTCAAATCAAGATGCCTATTTGGGCCCAATTTTATTGGACGGATGGGAGGACAAGGATTGA 1860 0.4296 MRWEKVEVKAIGTEGGGGGNEVYGPGKRWGHTCNAVKGGRLVYVFGGYGKDNCQTNQVHVFDTVKQTWSQPTLKGSPPTPRDSHTCTAIGDNLFVFGGTDGMNPLKDLHILDTSLHTWVSPTIRGEGPPAREGHSAAVVGKRLFIFGGCGKSADSNNEVYYNDLYILNTETFVWKCATTSGSPPSPRDSHSCSSWKNKIIVIGGEDGHDYYLSDVHILDTDTLIWRELSASGQLLPPRAGHSTVSFGKNLFVFGGFTDAQNLYNDLYMLDIDTGVWTNVTSATSGPSARFSVAGDCLDPFKGGVLVFIGGCNKSLEALDDMYYLYTGIARESEQRPEKLSLRKQLKLKCQEQNPNPSQNQVLVRYGVGSDMGQIMSVLNYSQPSRLNIPVNQSLPPGKKMFEAKVTENISEGYTIETVIDGKPLRGILFLNKPNSLYSAAQTPSRKRTLGEIDGVVSNGTHSNQLKTPKLPKQNQMENQEAFCGDSSESHEHRPEPIPVVMSSNPMTADASDTHKVSANPEPEAAALNRNDEKHETPISLSGNLKKANDVTSSKDEVQTNDQTNVLISNFEVTRHDTKFDAPNYNTEFQKPAASESAFCLSNQDAYLGPILLDGWEDKD* 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02789 619 Pfam Galactose oxidase, central domain 40 89 - -
Phac3g02789 619 Pfam Kelch motif 128 172 - -
Phac3g02789 619 Gene3D - 180 330 IPR015915 GO:0005515
Phac3g02789 619 SUPERFAMILY Galactose oxidase, central domain 24 228 IPR011043 -
Phac3g02789 619 SMART kelc_smart 92 141 IPR006652 GO:0005515
Phac3g02789 619 SMART kelc_smart 41 91 IPR006652 GO:0005515
Phac3g02789 619 SMART kelc_smart 249 295 IPR006652 GO:0005515
Phac3g02789 619 SMART kelc_smart 198 248 IPR006652 GO:0005515
Phac3g02789 619 SUPERFAMILY Galactose oxidase, central domain 225 318 IPR011043 -
Phac3g02789 619 Gene3D - 2 179 IPR015915 GO:0005515
Phac3g02789 619 PANTHER ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 5 159 520 - -
Phac3g02789 619 Pfam Galactose oxidase, central domain 186 230 - -
Phac3g02789 619 Pfam Galactose oxidase, central domain 237 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02789 Phac-Chr3 30111725 30119640 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g02789 55 314 Acyl Lipid Metabolism Gene Families AT3G05420 29.670 7.91e-27 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02789 - - gmx:100820222 1092.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g02789 3 30111725 30119640 Phac3g02789 3 30111725 30119640 ECH