Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02707 ATGGCGAAACCTCGCAAGCCCAAGAACAACGAAGACCCCAAGCCCGAAAACTCTGGTGCCCTAGTTCACCACCAAAAGCTATGCCTCTCAATCGACATCGACAAACGCCTAGTCCACGGGTACACTGAATTGGAGATTGCGGTGCCGGAGATTGGGATCGTAGGGTTGCATGCGGAGAATTTAGGGATTGAGTGTGTTTGGGTCGATGGTGAGCCCACGGAGTTCGAGTATTACCCGCATCAGCAGCAGCAGGTGGGAGATGATAAGAGGTTTAGTTCTGTGTGTTCTCCTAGCTCTGCTGCCGATGCTGCTGTCTCAGTGTACATGTCCTCTCTGGAGAAGGAGCTGGTGCCCAATTTACTCATTAACTGCTGTAAACCTACCAAGGCTGAAAGTGAACAGCAGCCGGAGCAACCAGTTCCCGAGAACGGGTTTCACTCCTCGGCCGAGCCCAAACAGAATGTGAGAATTGTTCGTATTGACTATTGGATAGAAAAGGCAGAGACAGGAATCCACTTCAGAAATAATCTTCTTCATACTGATAATCAGATAAGGAGAGCAAGATGTTGGTTCCCCTGTATAGATGACAATTCACAACGATGCTGCTATGACCTGGAGTTCACCGTATCACACAATCTTGTGGCTGTTAGTACGGGATTCTTGCTTTATCAGGTCTTAAGCAAGGACAATCCTCCTCGGAAAACATATGTCTATAAATTGGATGTTCCAGTTGCTGCAAGGTGGATATCTTTGGCTGTTGCCCCATTTGAAATTCTTCCTGATCACCAATTTAGTCTCATATCACACATGTGTTTGATGCCTAATCTGTCAAAGATGCGGAATACAGTGGAATTTTTCCATAGTGCCTTCAGCTGCTATAAGGATTATCTTTCTGTAGACTTCCCATTTGACTCATATACGCAAGTTTTCATAGAGCCAGAGATGGCTGTGTCTTCGATGAGTTTAGGAGCCTCTGTGAGTATATTTAGTTCACAAGTTTTGTTTGATGACAAGGTTATTGACCAGACTATTGACACAAGGGTAAAACTTGCATATGCTCTTGCAAGACAGTGGTTTGGGGTGTATATCACTCCTGAGGCACCAAATGATGAGTGGCTCTTGGATGGACTTGCTGGCTTCTTGACAGATTTTTATATCAAGAAACATTTGGGAAATAATGAGGCACGGTACCGGAGATACAAGGCAAATTGTGCTGTTTGCAAAGTTGATAATGGTGGAGCGACAGCTTTGAGCTGTTCAGCTTCCTGCAAAGATTTATATGGAACTCAGTTTATTGGGTTGTATGGAAAAATAAGATCATGGAAGTCTGTGGCTGTTCTTCAGATGTTGGAAAAGCAAATGGGTCCTGAATCTTTCCGTAGAATTTTACAAACAATAGTTTCACGGGCTCAAGATAAAACACGTTCCATGAAGACTCTAAGTACTAAGGAGTTTCGACATTTTGCCAATAAGGTTGGGAATCTTGAACGTCCATTTCTTAAGGATTTCTTTCCACGGTGGGTTGGTTCTTGTGGATGTCCTGTTCTAAGGATGGGGTTTTCCTATAACAAAAGGAAGAATATGGTTGAATTGGCTGTGTTGCGAGGATGTACAGCATTGCAGACTTCAACTACATCCAGTCTTGATATTAATCCTGATACAGAAAATCGAGATGGAGATACTGGATGGCCTGGTATGATGAGCATCAGGGTATATGAACTTGATGGTATGTATGACCATCCAATTCTGCCAATGGCTGGAGAAGCATGGCAACTATTGGAAATACAATGCCACTCAAAGCTTGCTGCTAGACGCTTTCAGAAGCCCAAAAAAGGATTAAAACATGATGGATCTGATGATAATGGTGACGTGCCTTCCATGGACGTGCGGTCAAATACCGAGTCGCCTTTATTATGGATCAGAGCAGATCCTGATATGGAGTACCTTGCTGAGGTTCATTTTAACCAACCAGTACAGATGTGGATCAATCAATTAGAGAAGGACAAAGATGTTATTGCCCAGGCACAAGCAATTGCAGCCCTTGAGGCATCACCACAACTATCATTTTCAATTGTAAATGCCCTAAACAATTTTCTCAGTGACTCCAAGGCCTTTTGGAGAGTACGGATTGAAGCGGCATTTGCATTGGCAAATTCAGCATCTGAGGAAACTGATTTTTCTGGTCTACTCCATTTGGTGAAATTTTACAAGAGTAGGAGGTTTGATCCTGACATTGGACTCCCAAAGCCAAATGATTTTCACGATTTTGCTGAGTATTTTGTTCTTGAGGCTATTCCACATGCTGTTGCCATGGTTAGAGCCGCTGACAGGAAAAGCCCAAGAGAGGCTATTGAGTTTGTTCTACAGCTATTGAAGTACAATGACAACAATGGGAACCCCTACTCAGATGTCTTCTGGCTTTCTGCATTAGTCCAATCAGTTGGTGAGCTTGAGTTTGGGCAACAGAGTATTCTCCTGTTGTCATCACTTCTCAAACGCATTGACCGGCTTCTACAATTTGATAGTCTCATGCCAATATACAATGGAATCCTGACTATCAGTTGTATCCAAACATTGACCCAGATTGCTTTAAAGCTTTCGGGGTTCATTCCTCTTGATCGTGTTTATGAACTTGTAAAGCCTTTTCGTGACTTGAAGACACTGTGGCAAGTTCGAATTGAAGCAAGTAGAGCACTCCTTGATCTTGAATTCCACTGCAAGGGCATGGATTCAGCATTGCTTTTATTTATCAAGTACTTAGAGGAGGAGAATTCCTTAAGAGGGCAGTTAAAGCTAGCCACCCATGTTATGAGGCTATGTCAGATGAGGGATGGATTGAATTCAGATGAGGAAATTACAAGCCAAACTCTAGTCTCTATGCTTAATTTACTGGAAGGGCGTACTGCATTTAATAATGTCTTTCTCCGGCATTATCTGTTCTGCATACTACAAATAATTGCTAGAAGACCACCAACTCTTCATGGGATTCCCAGGGAAAATAGAACGTTGCATATGAGTCTTACAGAAGCTTGTAACTATCAGAAGAACATTTTTGTTCTTGATTCGGACAGTAAACCTTTGGATCTGCCAAGCTCTACCCAAAACCCTACCCCAAATCTTGGCCTGGATGGTTTGAGCGATGCACTTTACGAAGCTTCTAAGGACCAACCTACTGAAGCTCCACCACAGGTGCACATTGAAGCTCTTCTAAAGGAAGCGACCCTAGAGAAAGCTGAAGAGGGATTTACTGAAATTCCACAGGAAGCACCAATGGAAGCTCCAAATGAAGTTTCCAAGGAAGCAGATACTGTATCGAATAGCCATGAAAGAAAGAGGCTCATTAAAATAAAGGTCAAACAATCTTCTGCCACCAGTAGGGCTGATACTGATAATCAAGTGGTTGAACGTTCTTTAGGTGGTCGTAATGAAATGGATCATGGAGCTAGCAGTTCAGTTTCTGTAGATGCACCGCAGAGGAATTTTGCCGAGACTCTTAGCATCAGTAATCACAATATAGACGAAGTTAATTCTTGGCATGATCGTGGTTCGCGCATGACTGCTAGCATTGGTAGTGCTAAATTTTTGAGTGACGGTGATGAATTGGTCAAAGAACTTCAGTGCACTGCTGATTCAAGTATAGTTTATTCACAACCTCAGCCTGAAGATCCGTCATCGTCCAGTATTATACAGGATAACAATGTAGATGCGGATGCACGACGATATGCCAGCCTTCAAACTCTTTCAGTTGCAAGATTTGATCCTGATGGAGAATCGTTAGGTAAAGAAATTTCTGCTCGTGGCAAGGAAAAGCACAAAAGCAAGGATAAGAAACGAAAACGGGAAAGTAATAAAGACCATGATGATCCAGAATATTTGGAGCGAAAACGATTAAAGAAGGAGAAAAAACGACGGGAAAAAGAAATGGCAAAACTTCAGAGTGATGAAGCGAAGAGATCCTCTGTAGACTTGTCAAGTAAGAAAGAGGAACCTTTAGTGGACGTTGCTAGACAAGTTAAATCTGTTGAGCCCAGCGGATTTAATTCTAAATTAGAAACCAAAAAGATTGATATCAAACCGGATCCATCTGAAGGCACATCTACTGGTCCAAAAATTCGAATTAAAATTAAAAACCGAATGCTCAACAAGTGA 4149 0.4249 MAKPRKPKNNEDPKPENSGALVHHQKLCLSIDIDKRLVHGYTELEIAVPEIGIVGLHAENLGIECVWVDGEPTEFEYYPHQQQQVGDDKRFSSVCSPSSAADAAVSVYMSSLEKELVPNLLINCCKPTKAESEQQPEQPVPENGFHSSAEPKQNVRIVRIDYWIEKAETGIHFRNNLLHTDNQIRRARCWFPCIDDNSQRCCYDLEFTVSHNLVAVSTGFLLYQVLSKDNPPRKTYVYKLDVPVAARWISLAVAPFEILPDHQFSLISHMCLMPNLSKMRNTVEFFHSAFSCYKDYLSVDFPFDSYTQVFIEPEMAVSSMSLGASVSIFSSQVLFDDKVIDQTIDTRVKLAYALARQWFGVYITPEAPNDEWLLDGLAGFLTDFYIKKHLGNNEARYRRYKANCAVCKVDNGGATALSCSASCKDLYGTQFIGLYGKIRSWKSVAVLQMLEKQMGPESFRRILQTIVSRAQDKTRSMKTLSTKEFRHFANKVGNLERPFLKDFFPRWVGSCGCPVLRMGFSYNKRKNMVELAVLRGCTALQTSTTSSLDINPDTENRDGDTGWPGMMSIRVYELDGMYDHPILPMAGEAWQLLEIQCHSKLAARRFQKPKKGLKHDGSDDNGDVPSMDVRSNTESPLLWIRADPDMEYLAEVHFNQPVQMWINQLEKDKDVIAQAQAIAALEASPQLSFSIVNALNNFLSDSKAFWRVRIEAAFALANSASEETDFSGLLHLVKFYKSRRFDPDIGLPKPNDFHDFAEYFVLEAIPHAVAMVRAADRKSPREAIEFVLQLLKYNDNNGNPYSDVFWLSALVQSVGELEFGQQSILLLSSLLKRIDRLLQFDSLMPIYNGILTISCIQTLTQIALKLSGFIPLDRVYELVKPFRDLKTLWQVRIEASRALLDLEFHCKGMDSALLLFIKYLEEENSLRGQLKLATHVMRLCQMRDGLNSDEEITSQTLVSMLNLLEGRTAFNNVFLRHYLFCILQIIARRPPTLHGIPRENRTLHMSLTEACNYQKNIFVLDSDSKPLDLPSSTQNPTPNLGLDGLSDALYEASKDQPTEAPPQVHIEALLKEATLEKAEEGFTEIPQEAPMEAPNEVSKEADTVSNSHERKRLIKIKVKQSSATSRADTDNQVVERSLGGRNEMDHGASSSVSVDAPQRNFAETLSISNHNIDEVNSWHDRGSRMTASIGSAKFLSDGDELVKELQCTADSSIVYSQPQPEDPSSSSIIQDNNVDADARRYASLQTLSVARFDPDGESLGKEISARGKEKHKSKDKKRKRESNKDHDDPEYLERKRLKKEKKRREKEMAKLQSDEAKRSSVDLSSKKEEPLVDVARQVKSVEPSGFNSKLETKKIDIKPDPSEGTSTGPKIRIKIKNRMLNK* 1383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02707 1382 FunFam Transcription initiation factor TFIID subunit 2 113 253 - -
Phac3g02707 1382 MobiDBLite consensus disorder prediction 1350 1382 - -
Phac3g02707 1382 MobiDBLite consensus disorder prediction 1253 1329 - -
Phac3g02707 1382 MobiDBLite consensus disorder prediction 1280 1296 - -
Phac3g02707 1382 MobiDBLite consensus disorder prediction 1118 1136 - -
Phac3g02707 1382 Gene3D - 655 938 IPR011989 -
Phac3g02707 1382 Coils Coil 1292 1319 - -
Phac3g02707 1382 MobiDBLite consensus disorder prediction 1255 1269 - -
Phac3g02707 1382 MobiDBLite consensus disorder prediction 1084 1157 - -
Phac3g02707 1382 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 275 517 - -
Phac3g02707 1382 SUPERFAMILY ARM repeat 444 993 IPR016024 -
Phac3g02707 1382 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 18 254 IPR042097 -
Phac3g02707 1382 MobiDBLite consensus disorder prediction 608 630 - -
Phac3g02707 1382 Gene3D Neutral Protease Domain 2 264 512 IPR027268 -
Phac3g02707 1382 Gene3D tricorn interacting facor f3 domain 20 253 IPR042097 -
Phac3g02707 1382 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 1 1303 IPR037813 GO:0005669
Phac3g02707 1382 MobiDBLite consensus disorder prediction 1304 1329 - -
Phac3g02707 1382 CDD M1_like_TAF2 24 508 - -
Phac3g02707 1382 FunFam Transcription initiation factor TFIID subunit 261 512 - -
Phac3g02707 1382 Pfam Peptidase family M1 domain 284 481 IPR014782 GO:0008237|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02707 Phac-Chr3 29504438 29527183 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02707 K03128 - gmx:100792795 2455.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g02707 3 29504438 29527183 Phac3g02707 3 29504438 29527183 ECH