Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g02683 ATGGGCAGTGGAGCTCTTGAAACGAATCGTTTAACAAATGGGGAAGCTGAGAACAGTGTTCACAAACAGGTTTCTCCTGCTCCTGCTGCACTCGACAACTCGCTTTCTGATGCCAGTAATGCAGTTACTGACCCTGATGTTCCTGCTAAGAGGGCCAGGCTGCAGAAGGAATTGACCTTTCAGGATATGTATCAAAATGATGGCGTGTTTGATGAGGATGACGAGGATGACAGTGATTGGGAGCCGTTTCAGTTACACAAGTGTGTGGAATTTGAAATCAAAAAGTGGTGCTGCAGAAATTGTACTATGACTAACTTGGATTGCAATGACTGTTGCTATATATGTGGGGAGCACAGGGAGTCTAAAATCCTCAGCCATGGGTTTTTTGCATCTCCTTTAGCTCAAGACGAGGATCTGATTGAAGTCCATGGAGATGTAAAAGGACTGAAAGATGTTGGCTCACAGGAATCAGTGGCAAATAGTTCTACGGCAATTGGCTTTGATGAGAGAATGTTGTTGCATGCAGAAGTTGAAAAGAAATCACCTCCACATCCTGAGAGGCCAGATCGTCTTCAAGCCATTGCTGCTAGTCTTGCTAGAGCCGGCATATTTCCTGGAAAATGCTATTCAATTCCTTCTAGGGAAATCACACCAGAAGAACTTATTACGGTTCATTCTTTGGAGCATATTGAGTCTGTGGAGGTTACAACTGAATCACTCTCTAGTTATTTCACTCCAGACACATATGCCAATCAGCATTCAGCACTTGCTGCTAGGTTGGCCGCTGGGTTATGTGCTGATCTGGCATCAGCAATTGTTTCCGGACGTGCCAAAAATGGATTTGCCTTGGTTAGGCCTCCTGGTCATCATGCTGGTGTAAGACAGGCAATGGGGTTCTGCCTTCACAATAATGCTGCTGTGGCAGCATTGGCTGCTCAAGCTGCAGGGGCTAGGAGGGTGCTAATTTTAGATTGGGATGTTCATCATGGAAATGGAACACAAGAAATATTTGAACAGAACAAATCGGTCTTGTATATATCATTGCATAGACATGAGGATGGAAAGTTTTATCCTGGTACTGGAGCTGCTGAAGAGGTAGGTAGTATGGGCGCTGAAGGGTACTGTGTGAATATTCCATGGAGCCGAGGAGGAGTTGGTGACAATGACTACAATTTTGCATTTCAGCATGTTGTTCTTCCTATAGCTTCTGAGTTTAATCCAGATTTTACCATAGTATCTGCTGGATTTGATGCTGCAAGAGGTGATCCCCTAGGATGTTGCGATATTACTCCCTCTGGCTATGCACACATGACGCATATGTTGAATGGCCTCTCTGGTGGAAAATTGCTTGTTATTCTTGAGGGGGGCTATAATCTTCGATCTATATCATCTTCTGCAACTGCAGTAATCAAGGTATTACTGGGTGAGAATGCTGGATGTGAACTGGAAAATAGTTTCCCTTCCAAAGCTGGCCTGGTAACCGTTCTGGAAGTCCTCAAAATTCAGATGAAGTTTTGGCCTTCCCTGGGTCCGATTTTTGTGAATTTGGAGTCACAATGGCGGATGTACTGTTTCGAAAAAAAAAGAAAACAGATTAAGAAACGACGCCGACTTCTGGTTCCAATGTGGTGGAGGTGGGGACGAAAAAGTTCCTTGTTCTATTTCATGAACGGCCATCTTCATGAAAAATCAAAGTGA 1698 0.4417 MGSGALETNRLTNGEAENSVHKQVSPAPAALDNSLSDASNAVTDPDVPAKRARLQKELTFQDMYQNDGVFDEDDEDDSDWEPFQLHKCVEFEIKKWCCRNCTMTNLDCNDCCYICGEHRESKILSHGFFASPLAQDEDLIEVHGDVKGLKDVGSQESVANSSTAIGFDERMLLHAEVEKKSPPHPERPDRLQAIAASLARAGIFPGKCYSIPSREITPEELITVHSLEHIESVEVTTESLSSYFTPDTYANQHSALAARLAAGLCADLASAIVSGRAKNGFALVRPPGHHAGVRQAMGFCLHNNAAVAALAAQAAGARRVLILDWDVHHGNGTQEIFEQNKSVLYISLHRHEDGKFYPGTGAAEEVGSMGAEGYCVNIPWSRGGVGDNDYNFAFQHVVLPIASEFNPDFTIVSAGFDAARGDPLGCCDITPSGYAHMTHMLNGLSGGKLLVILEGGYNLRSISSSATAVIKVLLGENAGCELENSFPSKAGLVTVLEVLKIQMKFWPSLGPIFVNLESQWRMYCFEKKRKQIKKRRRLLVPMWWRWGRKSSLFYFMNGHLHEKSK* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g02683 565 MobiDBLite consensus disorder prediction 1 47 - -
Phac3g02683 565 MobiDBLite consensus disorder prediction 1 20 - -
Phac3g02683 565 SUPERFAMILY Arginase/deacetylase 160 493 IPR023696 -
Phac3g02683 565 ProSitePatterns Zinc finger RanBP2-type signature. 96 115 IPR001876 -
Phac3g02683 565 Pfam Histone deacetylase domain 184 472 IPR023801 -
Phac3g02683 565 Gene3D Histone deacetylase domain 160 511 IPR037138 -
Phac3g02683 565 PANTHER HISTONE DEACETYLASE 9-RELATED 138 510 IPR017320 GO:0000118|GO:0004407|GO:0006325|GO:0016575
Phac3g02683 565 FunFam Histone deacetylase 15 156 528 - -
Phac3g02683 565 PRINTS Histone deacetylase superfamily signature 286 309 IPR000286 -
Phac3g02683 565 PRINTS Histone deacetylase superfamily signature 407 417 IPR000286 -
Phac3g02683 565 PRINTS Histone deacetylase superfamily signature 319 334 IPR000286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g02683 Phac-Chr3 29428828 29438431 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g02683 - - gmx:100804724 947.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g02683 3 29428828 29438431 Phac3g02683 3 29428828 29438431 ECH