Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01776 ATGGCAAGTTATTTTAGATTTTCGAAAGCTTTGGTTATGCTAGGGTTAACCTTCGCAGTGCTCACACAGGCACAATCACAACCTTGGTCATTACTCCAAGCACCAAAAGACCTAACCCTGAAGCTTATTCGTGATCCTGTGACCCTTTCATTAGCCTCAACAGACTTTGGCCACATAGTTCATGACAACCCTTTTGCAATTTTTTCTCCATCGTCCATTAGTGACATCTCTCTGTTGATAAATTTCTCGAATTCTCTCCCCATCCCTTTCACCATAGCTCCTAGAGGGCAAGCACATTCGGTTAACGGACAAGCCATGACAAATGACGGGGTTGTGGTGAACATGACTCAGTTGAATGGGTTTAGAAACGGGTCTGGGATTGTAGTAGTGTCTGATGGCACTCCATATGCTGATGTGGGTGGAGAACAAATTTGGATTGATGTGTTGCATGCAACACTTGAACACGGACTCACACCACTCTCTTGGACTGACTACTTGTTCTTATCGGTTGCTGGAACTCTCTCCAATGCAGGGATTAGTGGCCAATCCTTCAGGTTTGGTCCTCAGATTTCCAATGTTCATCAATTGGATGTTGTTACAGGGAAAGGAGACCTAGTGACATGTTCTTCGGAGAACAACTCAGAGTTATTTTATGCCGTCCTAGGAGGACTAGGTCAATTTGGAATTATAACTAGGGCAAGAATAGCTCTTGGACCTGCACCAACTAGGGTGAAGTGGCTCCGTTTGCTTTACAACAATTTCTCTGCTTTTTCTGCAGACCAAGAACACTTAATCTCGTTGAATGGAAGAAACGAGACCATTGCTGCTGATTATGTAGAAGGTTTCCTTCTGCTAAATCAGCCACCATTGGATCTTTCCTCTTTTCCAGCACCTGATCAACCTCGTATATCTTCCCTAGTAACACAATACGGCATCATCTATATCATAGAGCTTGTGAAATATTACGACAATAGTACTCAAGAACATGTTGAAGAGGAAGTAAGACTTTTGGTGGAGGGGTTGAAGTTTGTTCCTACGTTTATGTTCGAAAAAGATGTATCATACGAAGAGTTCCTGAACAGAGTTCATTCTGACGAGCTTTTCTTAAGATCACAAGGACTTTGGGATGTCCCTCATCCTTGGATAAACCTCTTTGTTCCAGGATCTCGAATCTCAGATTTCAATGAAGGTGTGTTCAAGGGCATTATTCTGAAGCAAAATATAACTGCAGGAATTGCGATAATCTACCCCATGAATCGATCCAAGTGGAATGATAAGATGTCTGCAGTTACACCTAATGAAGATGTTTTCTATGTTGTGTCACTTCTTCATGCAACTGGGTTTGATAAAGTGGAGGAATTTCAAGCTCAAAACCAACAAATATTAGATTTCTGTGAGGATGCTGGTATTGAGATCAAGCAATATCTTCCCCAAAACAAAACAAGGAAAGAATGGATGAAACAGTTTGGCTCCAAATGGAAAATTTTCCAAGAAAGAAAAACTCAATTTGATCCCAACAGAATATTGTCACCTGGTCAGAGGATTTTCAATTAA 1554 0.4131 MASYFRFSKALVMLGLTFAVLTQAQSQPWSLLQAPKDLTLKLIRDPVTLSLASTDFGHIVHDNPFAIFSPSSISDISLLINFSNSLPIPFTIAPRGQAHSVNGQAMTNDGVVVNMTQLNGFRNGSGIVVVSDGTPYADVGGEQIWIDVLHATLEHGLTPLSWTDYLFLSVAGTLSNAGISGQSFRFGPQISNVHQLDVVTGKGDLVTCSSENNSELFYAVLGGLGQFGIITRARIALGPAPTRVKWLRLLYNNFSAFSADQEHLISLNGRNETIAADYVEGFLLLNQPPLDLSSFPAPDQPRISSLVTQYGIIYIIELVKYYDNSTQEHVEEEVRLLVEGLKFVPTFMFEKDVSYEEFLNRVHSDELFLRSQGLWDVPHPWINLFVPGSRISDFNEGVFKGIILKQNITAGIAIIYPMNRSKWNDKMSAVTPNEDVFYVVSLLHATGFDKVEEFQAQNQQILDFCEDAGIEIKQYLPQNKTRKEWMKQFGSKWKIFQERKTQFDPNRILSPGQRIFN* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01776 517 Gene3D - 243 475 IPR016170 -
Phac3g01776 517 Pfam FAD binding domain 66 209 IPR006094 GO:0050660
Phac3g01776 517 Gene3D - 115 242 IPR016169 -
Phac3g01776 517 Pfam Cytokinin dehydrogenase 1, FAD and cytokinin binding 241 516 IPR015345 GO:0009690|GO:0019139|GO:0050660
Phac3g01776 517 Gene3D - 46 516 IPR016167 -
Phac3g01776 517 PANTHER GULONOLACTONE OXIDASE 28 517 - -
Phac3g01776 517 SUPERFAMILY FAD-binding/transporter-associated domain-like 42 239 IPR036318 GO:0050660
Phac3g01776 517 SUPERFAMILY FAD-linked oxidases, C-terminal domain 241 517 IPR016164 GO:0003824|GO:0050660
Phac3g01776 517 ProSiteProfiles PCMH-type FAD-binding domain profile. 60 240 IPR016166 GO:0071949
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01776 Phac-Chr3 20411234 20415233 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01776 K00279 - gmx:100816815 866.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g01776 3 20411234 20415233 Phac3g01776 3 20411234 20415233 ECH
Phac3g01776 3 20411234 20415233 Phac9g03839 9 37130037 37133927 PCT