Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01769 ATGTGGACAGAGAACTGGAGTGGCTGGTACACTGAGTTTGGTGGCGCGGTCCCTCGTAGACCTGCAGAAGACATGGCCTTCTCAGTTGCAAGATTCGTACAGAATGGCGGTTCATTTGTTAATTATTATATGTTCCATGGGGGAACTAACTTTGATCGGACATCAGGTGGCCCCTTCATTGCCACCAGCTATGACTATGATGGTCTCCTTGATGAATACGGACTTTTAAATGAGCCAAAATGGGGGCATTTGAGAGATTTGCATAAAGCAATAAAGCTATGTGAGGCAGCTTTAGTGTCCGTAGATCCTACAGTGACATGGCCTGGGCAAAACCTTGAGGTACATGTGTTCAAGACTTCTGGTGCTTGTGCTGCATTCCTAGCAAACTATGACACCAAATCTTCCGCAACTGTTACATTTGGAAATGGACAATATGACCTACCACCTTGGTCTATCAGCATCCTTCCTGATTGCAAAACTGAAGTTTTCAACACTGCAAGAGTTGGCGCTCAAAGCTCTCTGATGAAGATGACTGCTGTGAACACTGCATTTGATTGGCAGTCGTACAATGAAGAGCCTGCATCGTCCAGTGAAGATGATCCCTTAATAGCATATGCACTCTGGGAGCAGATTAATATCACCCGAGATTCTACAGATTATTTGTGGTATATGACAGATGTGAACATTGATGCAAATGAAGGTTTTATAAAGAGTGGACAATCTCCTGTTTTCACTGTGATGTCAGCTGGCCATGCTTTGCATGTTTTCATCAATGGTCAACTTTCAGGTACTGTTTATGGGGGATTGGAGTTCCCTAAATTAACATTTAATGATAGTGTTAAGCTGAGGGTTGGCAATAATAAGATATCTTTACTAAGTATTGCCGTGGGTCTCCCGAATGTTGGGACACACTTTGAGACATGGAATGCTGGGGTGTTAGGCCCAGTCACACTTAATGGTCTAAATGAGGGGACTAGAGACTTGTCTAAACAGAAATGGTCTTACAAGATTGGTCTCAAGGGAGAAGCCTTAAACCTTAACACTGTAAGTGGGAGTAGTTCAGTTGAATGGGTACAAGGATCATTATTGGCTAAAAAACAGCCTTTGACATGGTACAAGACAACTTTTAGCACACCAGTAGGCAATGATCCATTAGCTCTAGACATGATTAGCATGGGAAAGGGCCAGGTATGGATAAATGGTCGAAGCATTGGACGCCATTGGCCTGGATATATAGCACGCGGTCATTGTGGGGAATGTTACTACGCTGGAACCTACAATGATAAAAAATGCCAGACAAATTGTGGAGAACCCTCCCAGAGATGGTACCATATTCCTCGGTCGTGGCTGAACCCAAGTGGGAACTATCTGGTTGTGTTGGAAGAATGGGGAGGGGACCCTAATGGAATTTCTTTGGTGAAAAGAACAACAGCAAGTGTTTGTGCTGACATATATGAAGGACAACCAACTCTTAAAAACAGGCATATGCTAGACACTGGCAAAATTAATAGACCCAAAGCTCACTTGTGGTGTCCACCTGGGCTAAAGATCTCTCAGATTAAATTTGCTAGTTATGGACTGCCACAGGGAACTTGTGGAAACTATAGAGAGGGAAGCTGCCATGCTCACAGATCATATGATGCTCCTGAAAAGAACTGCATTGGCAAGCAATCTTGCTCGGTGACTGTAGCTCCTGAAGTTTTTGGGGGAGATCCATGTCCGGGAACTGCAAAGAAGCTCTCACTTGAGGCACTATGCAGCTAG 1764 0.441 MWTENWSGWYTEFGGAVPRRPAEDMAFSVARFVQNGGSFVNYYMFHGGTNFDRTSGGPFIATSYDYDGLLDEYGLLNEPKWGHLRDLHKAIKLCEAALVSVDPTVTWPGQNLEVHVFKTSGACAAFLANYDTKSSATVTFGNGQYDLPPWSISILPDCKTEVFNTARVGAQSSLMKMTAVNTAFDWQSYNEEPASSSEDDPLIAYALWEQINITRDSTDYLWYMTDVNIDANEGFIKSGQSPVFTVMSAGHALHVFINGQLSGTVYGGLEFPKLTFNDSVKLRVGNNKISLLSIAVGLPNVGTHFETWNAGVLGPVTLNGLNEGTRDLSKQKWSYKIGLKGEALNLNTVSGSSSVEWVQGSLLAKKQPLTWYKTTFSTPVGNDPLALDMISMGKGQVWINGRSIGRHWPGYIARGHCGECYYAGTYNDKKCQTNCGEPSQRWYHIPRSWLNPSGNYLVVLEEWGGDPNGISLVKRTTASVCADIYEGQPTLKNRHMLDTGKINRPKAHLWCPPGLKISQIKFASYGLPQGTCGNYREGSCHAHRSYDAPEKNCIGKQSCSVTVAPEVFGGDPCPGTAKKLSLEALCS* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01769 587 PANTHER BETA-GALACTOSIDASE RELATED 1 491 IPR001944 GO:0004553|GO:0005975
Phac3g01769 587 Gene3D - 186 330 - -
Phac3g01769 587 FunFam Beta-galactosidase 195 332 - -
Phac3g01769 587 Gene3D - 339 481 - -
Phac3g01769 587 FunFam Beta-galactosidase 43 170 - -
Phac3g01769 587 Pfam Galactose binding lectin domain 509 586 IPR000922 GO:0030246
Phac3g01769 587 FunFam Beta-galactosidase 498 587 - -
Phac3g01769 587 CDD Gal_Rha_Lectin_BGal 504 586 - -
Phac3g01769 587 Pfam Beta-sandwich domain in beta galactosidase 98 168 IPR041392 -
Phac3g01769 587 Gene3D - 498 587 IPR043159 -
Phac3g01769 587 SUPERFAMILY Galactose-binding domain-like 332 491 IPR008979 -
Phac3g01769 587 Pfam Glycosyl hydrolases family 35 1 90 IPR031330 -
Phac3g01769 587 PRINTS Glycosyl hydrolase family 35 signature 38 53 IPR001944 GO:0004553|GO:0005975
Phac3g01769 587 PRINTS Glycosyl hydrolase family 35 signature 1 16 IPR001944 GO:0004553|GO:0005975
Phac3g01769 587 PRINTS Glycosyl hydrolase family 35 signature 367 381 IPR001944 GO:0004553|GO:0005975
Phac3g01769 587 PRINTS Glycosyl hydrolase family 35 signature 58 74 IPR001944 GO:0004553|GO:0005975
Phac3g01769 587 PRINTS Glycosyl hydrolase family 35 signature 394 410 IPR001944 GO:0004553|GO:0005975
Phac3g01769 587 ProSiteProfiles SUEL-type lectin domain profile. 501 587 IPR000922 GO:0030246
Phac3g01769 587 SUPERFAMILY (Trans)glycosidases 1 95 IPR017853 -
Phac3g01769 587 Gene3D Glycosidases 1 95 - -
Phac3g01769 587 SUPERFAMILY Galactose-binding domain-like 152 322 IPR008979 -
Phac3g01769 587 FunFam Beta-galactosidase 340 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01769 Phac-Chr3 20346698 20352476 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01769 1 587 Glycoside Hydrolase AT3G13750 68.297 0.0 837
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01769 - - gmx:106795462 1133.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g01769 3 20346698 20352476 Phac3g01769 3 20346698 20352476 ECH
Phac3g01769 3 20346698 20352476 Phac9g03850 9 37255176 37261834 PCT