Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01362 ATGGCCGTCGTAACTAACAACGGCAAGCGCCGCCAGCATTGGCTCTCCGCGAATCACCACCTTCCATCTCCCAATTCCAAAAGGCCCAGACTGTCAACAACATCCGAAAACCACGCGCACTCCGTGTTATCCTCGAGTAGTATCGTTTCCAGAATTTCCAAATATCCCGAAGCCAAGCCACTGATGCGTAGGGAGGTTCACGCGCCGTGTAGTTCCCGTAAGTTTGCTTTTCCTACCTCTAATAGAATGAAATCGAGCTTGAATGCTAGTAGTAGCTATTGTGATCGCAAGGAAGATATTGGTAACGATGTGGGCAACATGCTAAGTGAAAATTACGAAAGGACGAAAAATTCAGCCTTAGCTAGCATTCGGTTTGGGGAAAAGGGTAAGGAGGTGAATGAAGCGGATGATGATAGTCCCAAGGGCATGGTTTCCGAAGATTCGGGTGTGGAGGAGATTCGTTTTAGGGAAGACGGACGGGATGTGCGCTCTGTGGTGACGGAGCACAAGTGGCAAGAGGGTGATTTGGTTGTTATGGAAGTGAAGGATTCGGAAGCTAAGGATGTGCGTGCTGGTCATCATCAGCACTCAACTTCATCTGTGGTTTCTGAGTTGACTAACGGCGATTTGAATATTGTTAATGCTGTGAGGATGTTGGACACTCTGTCTTTAACTTCCGAGCGCGATCTTTCGGATGTTCATGCCTACAGGAAGTTGCTTGAGGCTGTTGACAAGCGCTCGGATACGATTATGAGGCTGTCGGCTGAAATTAAGCTTAATGAGAAGCGTAGGTCCACCTTTAAATTGTTGCGCCCAAAGAAGGAACTAGTAGAGGAAGTGCCATTGGAACCTTTTATTCCTCTTACTAAAGAGGAAGAAGTTGAGGTTGCACGTGCCTTTTCTGCAAACAGGAGGAAGATCTTGGTTGCCCATGAGAAATCTTGCATTGAGGTCTCAGGAGAAAAATTTCAGTGCCTTCGACCTGGTGCATGGTTAAATGATGAGGTAATAAATTTGTACCTTGAATTGCTAAAAGAGAGGGAGAGAAGAGAGCCGCAGAAGTTTCTGAATTGTCATTTTTTCAATACCTTTTTCTACAAGAAGTTAATAAGTGGCAAGAGCGGTTATGATTTCAAATCTGTGAGGAGATGGACCAGCCAAAAGAAACTGGGATATGGCCTACATGAATGTGATAAAATTTTTGTACCTATCCATAGAGAGATCCATTGGTGCTTGGCTGTTATAAATAAGAAGGATAAGAAATTTCAGTACTTGGATTCACTGAAAGGAATAGATACCCATGTGATGGAAGTTCTGGCTAGCTATATTGTAGATGAAGTAAAGGACAAGACTGGAAAAGATATCGATGTAAGTTCTTGGGAAAAAGAATTTGTTGAAGACCTTCCTGAGCAGCAGAATGGGTATGACTGTGGGGTTTTTATGATCAAATACGCTGACTTCTATAGCAGAAACTTGGCTCTGTGTTTCAACCAGGAACACATGTCGTACTTTCGGCGGAGAACAGCTAAAGAAATCTTGAGATTAAGAGCTAACTAA 1557 0.4387 MAVVTNNGKRRQHWLSANHHLPSPNSKRPRLSTTSENHAHSVLSSSSIVSRISKYPEAKPLMRREVHAPCSSRKFAFPTSNRMKSSLNASSSYCDRKEDIGNDVGNMLSENYERTKNSALASIRFGEKGKEVNEADDDSPKGMVSEDSGVEEIRFREDGRDVRSVVTEHKWQEGDLVVMEVKDSEAKDVRAGHHQHSTSSVVSELTNGDLNIVNAVRMLDTLSLTSERDLSDVHAYRKLLEAVDKRSDTIMRLSAEIKLNEKRRSTFKLLRPKKELVEEVPLEPFIPLTKEEEVEVARAFSANRRKILVAHEKSCIEVSGEKFQCLRPGAWLNDEVINLYLELLKERERREPQKFLNCHFFNTFFYKKLISGKSGYDFKSVRRWTSQKKLGYGLHECDKIFVPIHREIHWCLAVINKKDKKFQYLDSLKGIDTHVMEVLASYIVDEVKDKTGKDIDVSSWEKEFVEDLPEQQNGYDCGVFMIKYADFYSRNLALCFNQEHMSYFRRRTAKEILRLRAN* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01362 518 PANTHER SENTRIN/SUMO-SPECIFIC PROTEASE 115 511 - -
Phac3g01362 518 Gene3D Adenoviral Proteinase; Chain A 275 515 - -
Phac3g01362 518 MobiDBLite consensus disorder prediction 1 48 - -
Phac3g01362 518 ProSiteProfiles Ubiquitin-like protease family profile. 316 488 IPR003653 GO:0006508|GO:0008234
Phac3g01362 518 MobiDBLite consensus disorder prediction 18 48 - -
Phac3g01362 518 Pfam Ulp1 protease family, C-terminal catalytic domain 331 512 IPR003653 GO:0006508|GO:0008234
Phac3g01362 518 FunFam Ubiquitin-like-specific protease ESD4 275 516 - -
Phac3g01362 518 SUPERFAMILY Cysteine proteinases 284 517 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01362 Phac-Chr3 14920049 14926350 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01362 K08592 - gmx:100797013 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g01362 3 14920049 14926350 Phac3g01362 3 14920049 14926350 ECH
Phac3g01362 3 14920049 14926350 Phac9g04104 9 39083366 39090727 PCT