Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g01167 ATGGCTGACTTGTTGGAATGGCCAAAGAAAGATAACCGTCGCATGCTCCATGTTGTATACCGTGTTGGTGACCTTGAACGCACCATCAAGTTTTATACAGAATGCTTTGGAATGAAGCTTTTGAGGCATAGAGATATCCCGGAGGAAAAATATGCCAATGCTTTTCTTGGATTTGGCCCTGAAGAATCCCATTTTGTTGTTGAATTAACATATAATTATGGGGTGAGCTCGTATGACATAGGGGATGGCTTTGGACATTTTGCAATTGCGACTGAGGATATTTACAAATCGGTTGAACTCATACGGGCCAAGGGAGGAAACATCACTAGGGAGCCTGGACCAGTTCAGGGTGGGACTACTGTGATTGCCTTTGCGAAGGATCCAGATGGTTACACTTTTGGATTTATCCAAAGACCTACTGTTCATGACCCATTTTGTCAAGTAATGCTTCGTGTTGGAGATTTAGAACGCTCAATTAAGTTTTATGAAAAGGCTCTGGGCATGAAGGTAGTGAGGAAGGTTGATAAGCCTGAGTCCAAGTACACTGTAGCTATGCTTGGGTATGGAGAGGAGCACGAGACAACTGTGTTGGAGTTGACGTATAATTATGGTGTCACTGAATACTCTAAGGGCAATGCCTATGCACAGATTGCTATTGGTACTGATGATGTATACAAGAGTGCTGAGGTAGTTAGCCAAGTTATACAAGAGGTAGGAGGGAAGATTACACGGCAACCAGGGCCAATTCCTGGCCTTAATACAAAAACCACTTCGTTTTTAGATCCAGATGGTTGGAAAACTGTCTTGGTTGACAATGTTGATTTCTTGGAGGAACTGAAGTGA 843 0.4306 MADLLEWPKKDNRRMLHVVYRVGDLERTIKFYTECFGMKLLRHRDIPEEKYANAFLGFGPEESHFVVELTYNYGVSSYDIGDGFGHFAIATEDIYKSVELIRAKGGNITREPGPVQGGTTVIAFAKDPDGYTFGFIQRPTVHDPFCQVMLRVGDLERSIKFYEKALGMKVVRKVDKPESKYTVAMLGYGEEHETTVLELTYNYGVTEYSKGNAYAQIAIGTDDVYKSAEVVSQVIQEVGGKITRQPGPIPGLNTKTTSFLDPDGWKTVLVDNVDFLEELK* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g01167 280 Gene3D - 141 280 IPR029068 -
Phac3g01167 280 CDD GlxI_Ni 15 136 - -
Phac3g01167 280 ProSitePatterns Glyoxalase I signature 1. 147 168 IPR018146 GO:0004462|GO:0046872
Phac3g01167 280 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 14 138 IPR037523 -
Phac3g01167 280 FunFam Lactoylglutathione lyase 140 280 - -
Phac3g01167 280 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 147 266 IPR004360 -
Phac3g01167 280 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 15 134 IPR004360 -
Phac3g01167 280 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 13 144 IPR029068 -
Phac3g01167 280 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 144 272 IPR037523 -
Phac3g01167 280 NCBIfam lactoylglutathione lyase 14 138 IPR004361 GO:0004462|GO:0046872
Phac3g01167 280 Gene3D - 1 138 IPR029068 -
Phac3g01167 280 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 145 272 IPR029068 -
Phac3g01167 280 ProSitePatterns Glyoxalase I signature 1. 17 38 IPR018146 GO:0004462|GO:0046872
Phac3g01167 280 PANTHER LACTOYLGLUTATHIONE LYASE 3 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g01167 Phac-Chr3 11564996 11567694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g01167 147 271 Calmodulin-binding Proteins AT1G08110 28.477 2.65e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g01167 K01759 - gmx:100793089 542.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g01167 3 11564996 11567694 Phac3g01167 3 11564996 11567694 ECH
Phac6g02130 6 21018130 21022188 Phac3g01167 3 11564996 11567694 ECH
Phac3g01167 3 11564996 11567694 Phac6g02130 6 21018130 21022188 PCT