Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00897 ATGAGTGCCTTGAGTTTCAGGGGCTTCACATACATGTTTCTCATTGTATTTCTCATTTGGTCTTCCAATTTTGAAGCCTGCATTGCAAGAAGAGGCAAGCACTGGAGGCAAAGCAGCAGGGATGTCTCAGATGCTGTGTATAAGAAAAAAGGAAAGAATTATGGAAATGGTCACAACAAAAACCATGGTGGAGGATCAAAGCCAAAGCCTCCATCGCATAAAGGCACCCCAACATTACCAAAGCCTCCACCTCATAAAAACACTCCCTCACCACCATATCCACCACCCTCAAATGAGGATAACCCCACAATTCCCCCACCAAAACCTTACAATGGTGGCCATTCTTCTACCACCACCACCTTCAATGTGCTAGATTTTGGTGCCAAGGGAGATGGAAAAACTGATGACACAAAGGCATTTCAAGCAGCTTGGGCTGAAGCTTGCAAAGTAGAGGCATCAACCATGGTGGTTCCATCAGACTACGTCTTCTTTGTGGGGCCCATTTCATTCTCGGGCCCATACTGTAAACCCAACATCGTTTTTCAGCTTGATGGCACCATTGTTGCACCAACAAACCCCAATGCCTGGGGCAGAGGACTACTACAGTGGTTAGAATTTACTAAGTTGGTGGGAATTACCATTCAAGGAAATGGTATCATTGATGGAAAAGGCTCTGTGTGGTGGCAAGATCATCAATATGATGATCCTATAGATGATGAAGAAAAACTCATAATCCCTTTAAACCAGACTGTACCAAGTCCCCCACTGCCGATTCAAAGTGAGCTGGGAGGAAAAATGCCATCCGTCAAGCCAACTGCACTGCGGTTCTATGGGAGTTTTAATCCAACAGTTACAGGCATAACAATTCTAAATAGTCCACAATGCCACCTCAAGTTTGACAACTGCAATGGGGTCTTGGTCCATAATGTGAGCATATCATCCCCTGGGAACAGTCCTAACACAGATGGAATTCACCTTCAGAACTCCAAAGATGTGTTGATATATGGCAGCACAATGGCATGTGGTAATATTTCATTAACTTGTGCCACATTCTCTTTCATTTTGAAAATTTATTATGAGGGCCATGTGGTAGATAGGGACAAAATTAAAGTGAAAAGGAAAACTCAAGACAAAAGAAGAAAACCAAAAAAAACAGTTATTATATGCATGTTCTATGATTCTTAA 1185 0.427 MSALSFRGFTYMFLIVFLIWSSNFEACIARRGKHWRQSSRDVSDAVYKKKGKNYGNGHNKNHGGGSKPKPPSHKGTPTLPKPPPHKNTPSPPYPPPSNEDNPTIPPPKPYNGGHSSTTTTFNVLDFGAKGDGKTDDTKAFQAAWAEACKVEASTMVVPSDYVFFVGPISFSGPYCKPNIVFQLDGTIVAPTNPNAWGRGLLQWLEFTKLVGITIQGNGIIDGKGSVWWQDHQYDDPIDDEEKLIIPLNQTVPSPPLPIQSELGGKMPSVKPTALRFYGSFNPTVTGITILNSPQCHLKFDNCNGVLVHNVSISSPGNSPNTDGIHLQNSKDVLIYGSTMACGNISLTCATFSFILKIYYEGHVVDRDKIKVKRKTQDKRRKPKKTVIICMFYDS* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00897 394 Pfam Glycosyl hydrolases family 28 269 342 IPR000743 GO:0004650|GO:0005975
Phac3g00897 394 Pfam Glycosyl hydrolases family 28 150 231 IPR000743 GO:0004650|GO:0005975
Phac3g00897 394 PANTHER - 118 343 - -
Phac3g00897 394 MobiDBLite consensus disorder prediction 73 109 - -
Phac3g00897 394 SUPERFAMILY Pectin lyase-like 117 343 IPR011050 -
Phac3g00897 394 MobiDBLite consensus disorder prediction 49 117 - -
Phac3g00897 394 Gene3D - 111 349 IPR012334 -
Phac3g00897 394 Pfam Pectate lyase superfamily protein 121 147 IPR024535 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00897 Phac-Chr3 7891695 7897747 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00897 2 350 Glycoside Hydrolase AT1G60590 56.056 3.70e-123 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00897 - - gmx:732602 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac3g00897 3 7891695 7897747 Phac3g00897 3 7891695 7897747 ECH