Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac3g00348 ATGATGCTCTCGAATTGGATTCCTCCAATTTCGTTGGGAGCAAGAACTTTATTCAGAAGGAAATGGAATCCAAACCCAAATCCAAAGATCGTGACTCTGCAATGGTTCTCGTTTTCTTCATCCAAAGCTCCAATAGACATGGCTGCGAGAGATGGAGAACTCAGGGTTTTCCTTGTTGCCGGCGAAGTATCTGGAGATTCCATCGCTTCTCGCCTAATGGCTTCGCTTAAACTTTTCTCCCCTTTTCCTCTTCGTTTTGCTGGCGTTGGAGGGGCTAAGATGGCAAGTGAAGGGTTGCAATCTCAGTTTTCTATGGAGGATATTTCGGTAATGGGACTTTGGGAGCTTTTGCCTCATCTGTATAGAATCAGAGTGAAACTGAAGGAAACTGTTCAAGCAGCTGTTCTATTTGAACCTCATGTTGTATTAACTGTTGATTCTAAGGGCTTTTCTTTTCGGTTCTTGAAACAGCTTAGAGCTAGATACAGTCAGAAAAAGTTGGATTTTCCATCACACTTTCACTATGTAGCACCATCATTCTGGGCATGGAAAGGAGGTGAAGCAAGACTCAGAGGACTAGCAGAATTTGTGGATCATCTATTGTGCATACTTCCAAATGAGGACAAAATATGTAGATTGAATGGATTGTATGCAACAGCTGTTGGGCATCCGGTCCTGGAAGATGTTCTGGAATTGAATTTGAGAAACAATTCCTCGATTCATGAATGGAGGGCTGAAGGAAATGCTGAAGACTTCCGAAATAAGTATGCAGTGCCAGCAGGAGCCACTGTCATTAGCTTACTTCCTGGAAGCAGAGTGCAAGAAGTTCGTCGGATGCTTCCCATCTTTTCAGATACGGTGGAGCTGATGAAAGACACAGTTCCACAGTTGATGACAGTCATTCATGTAGCACCTAATGAGCATGTGGAAAATTTCATAGCTGGTGCTATTCATAGATGGCCTGTGCCAGTTATATTGATTCCAGGTGGAACAACACAACTGAGATATGATGCTTTTAGTGCCAGTAGAGTTGCATTATGCACATCTGGGACAGTTGCTGTGGAGCTGCAGCTTGCACGATTACCCTGTGTTGTGGCATATCGTGCCCATATTTTGACAGAATGGTATGTTCGGTACAAAGCTAAGATACAGTACATGTCACTTCCCAATATTCTTTTGGACAAGGCCATTATTCCTGAAGCACTCTTTCAATCTTGCAAACCTGCAAAGTTAGCCTTGTTGCTCAATGATTTAATACACGATAATGGTTGTCGAGAAGAACAAGTAGTTGCAGCACAAAAGTTTGTCAAGCTTATATTGCCTTCAGAGAGAATAAAGCACAATCTACCACAACAAAATTTGAAATCTTATGCCGACTACACTCCAAGTGCAATTGCAGCATTGACTATATTAAACCATGGGAGGCCAGTGACTAGTATCTAA 1443 0.4241 MMLSNWIPPISLGARTLFRRKWNPNPNPKIVTLQWFSFSSSKAPIDMAARDGELRVFLVAGEVSGDSIASRLMASLKLFSPFPLRFAGVGGAKMASEGLQSQFSMEDISVMGLWELLPHLYRIRVKLKETVQAAVLFEPHVVLTVDSKGFSFRFLKQLRARYSQKKLDFPSHFHYVAPSFWAWKGGEARLRGLAEFVDHLLCILPNEDKICRLNGLYATAVGHPVLEDVLELNLRNNSSIHEWRAEGNAEDFRNKYAVPAGATVISLLPGSRVQEVRRMLPIFSDTVELMKDTVPQLMTVIHVAPNEHVENFIAGAIHRWPVPVILIPGGTTQLRYDAFSASRVALCTSGTVAVELQLARLPCVVAYRAHILTEWYVRYKAKIQYMSLPNILLDKAIIPEALFQSCKPAKLALLLNDLIHDNGCREEQVVAAQKFVKLILPSERIKHNLPQQNLKSYADYTPSAIAALTILNHGRPVTSI* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac3g00348 480 PANTHER LIPID-A-DISACCHARIDE SYNTHASE 46 473 IPR003835 GO:0008915|GO:0009245
Phac3g00348 480 NCBIfam lipid-A-disaccharide synthase 56 438 IPR003835 GO:0008915|GO:0009245
Phac3g00348 480 Pfam Lipid-A-disaccharide synthetase 56 447 IPR003835 GO:0008915|GO:0009245
Phac3g00348 480 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 55 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac3g00348 Phac-Chr3 2393946 2399321 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac3g00348 32 475 Glycosyltransferase AT2G04560 61.211 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac3g00348 K00748 - gmx:100803768 824.313