Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04881 ATGGGAAGCCACGGATTCAGCAATCACAATAATGGGCAGCAGCAACGGTTAGGCATAACAGAGCCTATCTCATTGGGTGGACCTACTGAATATGATGTGATCAAGACTCGTGAACTTGAGAAGCACTTGCAAGATGCTGGCTTGTATGAGAATCAGGATGAGACAGTGAGTAGGGAGGAAGTACTTGGAAGGCTAGACCAGATTGTGAAAATTTGGGTCAAAACCACTAGCCGTGCGAAGGGACTAAATGAAGAACTGGTGCAAGAAGCAAATGCCAAGATTTTCACTTTTGGCTCATATAGACTTGGGGTACATGGTCCTGGAGCAGATATAGACATTCTTTGTGTGGGGCCAAGATATGCATCCAGAGATGAAGATTTCTTCGGCGAGCTGCATAAGATGCTATCTGAGATGACAGAAGTAACAGAGTTGAACCCTGTGCCTGATGCTCATGTACCAGTGATGAGGCTCAAGCTCAATGGCGTTTCAATAGATCTTCTTTATGCAAAATTATCTTTGTGGGTCATTCCTGAAAACTTGGATATATCACAGGACTCAATATTACAAAATGCAGATGAGCAAACTGTTCGTAGTCTTAATGGTTGTAGAGTCACTGATCAGGTCTTGCGTTTGGTTCCAAATATTCAGGTTACAGGTTTTCTTGGTGGTATAAACTGGGCGTTGCTTGTTGCACTAATATGCCAGCTATTTCCTAATGCAGTTCCCAATATGTTAGTGTGTCGATTCTTCAGAGTATATGCTAAGTGGCGTTGGCCAAATCCAGTAATGCTTTGTGGCATTGAAGAGGGATCACTTGGCCTTCAAGTTTGGGATCCTAGAAGATATCCCAAGGATAGATCCCATCTAATGCCAATAATTACTCCTGCTTATCCTTGCATGAACTCTAGCTACAATGCTATGGAGGCAAACAAGGCTGATTGGGACACTCTTTTTGAGCCTCATCCCTTTTTTGAAGCTTATAAGAATTATTTGCAGATAGACATATCAGCAGAGAATGCTCACAATCTTAGAAAATGGAAAGGGTGGGTTGAGTCTCGTCTGCGCCACTTGACATTGAAAATTGAGAGGCACACCTATGACATGCTTCAGTGTCATCCACATCCTGGTGACTTTCCTGACAAATCCAAACCTTACCACTGCTCCTACTTCATGGGACTGCAACGTAAGCAAGGTGTTCCTGTGAGTGGTGGTCAGAAGTTTGATATAAGAGCAACTGTTGAAGAATTTAAGCATTCTGTGAACATGTACACTCTATGGAAACCTGGAATGGATGTCCATGTCTCCCATGTGAAACGTGGTAGTATACCCTCCTTCGTTTTTCCTGGTGCTGTTAGACCTTCACACCCATCTAAAGTAACTTGGCACAGTAAGAAGAGGAGTTCAGAATTAAGTACTTTTGGCCATGGTCATGCAGAAGAGTCTGAAGAAGGTAAAGATTTTGTATTGGGAGCAAATGGTGATAGGAAGAGAAAAGTAGGTGAAGATAGTGTGGATAGCTTGAGAAGTTCCAAGTCCCTTGCATCTTTGTCTCCCTGCAGCAGGGAAGTTGATGAAGATGGAAATCCTGTTAGCATTGGTAGTAGTTGGTATGAGAAATGTAATGACTCAGAAATGAATGGCACTAGTGAAGAACAGGGTGAGAAACCTGATTTGGAAGATGGTGAAAAGGTAGCCATTGAGAAGATTATGTGTGGTCCATGTGATTCACTTGCACACCATGTCTTTTCAGAGGAACCTGATGAGCTCACACCACCATTATTAACTGGGATGCCTGCACCTGTGCCACACCAGAAGCCCCTTATCAGGTAA 1830 0.4317 MGSHGFSNHNNGQQQRLGITEPISLGGPTEYDVIKTRELEKHLQDAGLYENQDETVSREEVLGRLDQIVKIWVKTTSRAKGLNEELVQEANAKIFTFGSYRLGVHGPGADIDILCVGPRYASRDEDFFGELHKMLSEMTEVTELNPVPDAHVPVMRLKLNGVSIDLLYAKLSLWVIPENLDISQDSILQNADEQTVRSLNGCRVTDQVLRLVPNIQVTGFLGGINWALLVALICQLFPNAVPNMLVCRFFRVYAKWRWPNPVMLCGIEEGSLGLQVWDPRRYPKDRSHLMPIITPAYPCMNSSYNAMEANKADWDTLFEPHPFFEAYKNYLQIDISAENAHNLRKWKGWVESRLRHLTLKIERHTYDMLQCHPHPGDFPDKSKPYHCSYFMGLQRKQGVPVSGGQKFDIRATVEEFKHSVNMYTLWKPGMDVHVSHVKRGSIPSFVFPGAVRPSHPSKVTWHSKKRSSELSTFGHGHAEESEEGKDFVLGANGDRKRKVGEDSVDSLRSSKSLASLSPCSREVDEDGNPVSIGSSWYEKCNDSEMNGTSEEQGEKPDLEDGEKVAIEKIMCGPCDSLAHHVFSEEPDELTPPLLTGMPAPVPHQKPLIR* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04881 609 MobiDBLite consensus disorder prediction 1 20 - -
Phac2g04881 609 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 321 448 IPR011068 GO:0003723|GO:0016779|GO:0031123
Phac2g04881 609 SUPERFAMILY PAP/OAS1 substrate-binding domain 217 320 - -
Phac2g04881 609 MobiDBLite consensus disorder prediction 462 505 - -
Phac2g04881 609 FunFam Poly(A) polymerase alpha, putative 50 206 - -
Phac2g04881 609 Pfam Poly(A) polymerase central domain 217 311 IPR007012 GO:0043631|GO:1990817
Phac2g04881 609 PANTHER POLY A POLYMERASE 6 482 - -
Phac2g04881 609 Pfam Nucleotidyltransferase domain 82 145 IPR002934 GO:0016779
Phac2g04881 609 Gene3D - 217 311 - -
Phac2g04881 609 Gene3D - 18 216 - -
Phac2g04881 609 MobiDBLite consensus disorder prediction 1 24 - -
Phac2g04881 609 Pfam Poly(A) polymerase predicted RNA binding domain 323 380 IPR007010 GO:0003723|GO:0043631
Phac2g04881 609 Pfam Poly(A) polymerase predicted RNA binding domain 381 453 IPR007010 GO:0003723|GO:0043631
Phac2g04881 609 MobiDBLite consensus disorder prediction 587 609 - -
Phac2g04881 609 FunFam Nuclear poly(A) polymerase 4 322 437 - -
Phac2g04881 609 Gene3D Poly(A) polymerase predicted RNA binding domain 322 437 - -
Phac2g04881 609 MobiDBLite consensus disorder prediction 544 559 - -
Phac2g04881 609 CDD NT_PAP_TUTase 58 212 - -
Phac2g04881 609 MobiDBLite consensus disorder prediction 454 559 - -
Phac2g04881 609 Pfam Poly(A) polymerase central domain 18 216 IPR007012 GO:0043631|GO:1990817
Phac2g04881 609 Gene3D Beta Polymerase, domain 2 50 206 IPR043519 -
Phac2g04881 609 SUPERFAMILY Nucleotidyltransferase 18 211 IPR043519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04881 Phac-Chr2 45225112 45229569 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04881 K14376 - gmx:100816915 842.802
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g04881 2 45225112 45229569 Phac2g04881 2 45225112 45229569 ECH