Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04529 ATGGAAGGGGGAGAGGATCAATTTTATGATACTCGTGAGGAATTGTGTTCTGCCTCTGATGGGGGCTCGGATTGTTCAGAATCGGATGAATCTAGTTCTGGTATTAATAGACATGTTACCAGGCACAAGGTTTGGGTAAAAGACCTTGAAAGTGTTAACCAGAGACGCCTCAATTTCTTGAGATGGATGGATTTGGAGTCTGATTTAAATTATTCACCTAAGGGAGAGGAGTTTCAAGATCAACCTTGTGGGATTGACCGAATCACTGCAACAAGTGGGGCGGTGTTGAGGACTTCTCTTGCTGTTGAGGAGGGTCTTCCCTCAACCTCAAACCAGATTGTGTTGGACTCCTTGTCTGTTGAGGCTTCCGGTTCCCGAGAAAATCGCGAGAATTTGGCGTGTATGATAAGGAATTTGGATGATGGAACACAGTATATTGTGGATAAGCTGGGTCAGGATGGAACTCTTAGTACCCTGCGTGTTTTGGGTTCAAACAAATTGATTAGCTTGGAGGAGTTTCAGAGAAATACTTTGCCTTCATCGATGGTTCGCAGACATTTGCAGAGAGATACTGAAAACACAAGTTTGTTAGGAGTTGCAAAAAGAAAAATGAAGAGGGGTTGGCTAAGGAAACTGGATTCTATTGCTTGTTTTGTTCATAATCATGGGCTTCATGAAACTAAATGCGAAGACTGTGATTCAGTGGATAGAAGTAGGATACAAAGAGTTCGAGTTCATTCGTATAGGAAGCGGTTTAAGGAGCTTTCATCCCTTTACACTGAGCAGGAGTTCAAAGCACATAAGGGTGTTATTTTGACAATGAAATTCAGTCTTGATGGAAAATATCTGGCTAGTGGTGGTGAAGATGGCATGGTACGTGTGTGGAAGGTGGTTGAGGATGAGAGATCAAGTGAACTGGACATTCTGGACAATGATCCGTCAAATATATATTTCAAAATAAATAATTTTTCATGTGTTGCTCCCCTTGGTGTAGATAAAGAGAAATTAGTCAAAACGGAGAAGTTGAAAAGATCCCCCGAAGCAACCTGTGTGATTGTCCCACCAAGGACCTTCCGTATATCGGCAAAACCTTTGCACGAGTTCCAAGGTCACAGTGGTGACATTTTGGACCTTGCTTGGTCCAAAAGAGGGTTTCTACTGTCATCTTCTGTTGATAAGACAGTGCGCCTATGGCATGTGGGAATTGACAGATGTCTTAGAGTTTTCTCCCACAATAATTATGTGACATGCGTGAATTTCAATCCCATCAATGATAATTTTTTCATCAGTGGCTCAATAGATGGAAAAGTGCGCATCTGGGAAGTTGTTCACTGTAAGGTCAGTGATTACATTGATATCAGAGAGATAGTCACAGCTGTGTGCTTCCGTCCAGATGGAAAGGGCACAATTGTGGGCACCATGGCAGGCAATTGCCGTTTCTACAATATCCAAGATAATCATCTGCAATTGGATGCTCAGTTGTGTTTACGAGGAAAAAAGAAGACATCAGGGAAAAGGATCACTGGTGTTCAGTTTTCACCAACTGACCCAAGCAAATTATTGGTTGCTTCTGCTGATTCACATGTCTGTATACTTTCTGGAGTTGACATAATCTACAAATTCAAGGGCCTAAGAAGTGCAGGTCAGATGCATGCTTCCTTCACCACTGACGGGAAACATATCATCTCCGTTAGCGAGGATTCAAATGTATGTATATGGAATTACACTGGCCATGATAGGAGTACTTCCAAAGCAAAGAAAATTTGGTCTTCAGAGAGTTTTCTCTCCCACAACTCGGTAATCGCTGTACCTTGGTGTGGCATTGAGTCAATCCCAGGAACACTCTTATCCCCTTCGCTAGGAGAGGATGCAAATCAGAGGTGTTCGCTGCCTTCACCGGATTGTTTCTTCTTGAGTCGGGGATTTTTGTCAGAGTTGATCCCAAAGGTTTCTGCAACGTGGCCCGAGGAGACACTTGTGGACTCAAATCAAACACAAACTGTTGTTTCTCCCACAATGTGTAAATCAGAGTACAAGTTCTTGAAAAGTGCTTGCAAGGGAATGTCTAATTCCCACTTGTGGGGCCAAGTAATTGTGACAGCAGGATGGGATGGATACATAAGAGTGTATCAGAATTATGGATTACCTGTTCGTGGCTGA 2160 0.4282 MEGGEDQFYDTREELCSASDGGSDCSESDESSSGINRHVTRHKVWVKDLESVNQRRLNFLRWMDLESDLNYSPKGEEFQDQPCGIDRITATSGAVLRTSLAVEEGLPSTSNQIVLDSLSVEASGSRENRENLACMIRNLDDGTQYIVDKLGQDGTLSTLRVLGSNKLISLEEFQRNTLPSSMVRRHLQRDTENTSLLGVAKRKMKRGWLRKLDSIACFVHNHGLHETKCEDCDSVDRSRIQRVRVHSYRKRFKELSSLYTEQEFKAHKGVILTMKFSLDGKYLASGGEDGMVRVWKVVEDERSSELDILDNDPSNIYFKINNFSCVAPLGVDKEKLVKTEKLKRSPEATCVIVPPRTFRISAKPLHEFQGHSGDILDLAWSKRGFLLSSSVDKTVRLWHVGIDRCLRVFSHNNYVTCVNFNPINDNFFISGSIDGKVRIWEVVHCKVSDYIDIREIVTAVCFRPDGKGTIVGTMAGNCRFYNIQDNHLQLDAQLCLRGKKKTSGKRITGVQFSPTDPSKLLVASADSHVCILSGVDIIYKFKGLRSAGQMHASFTTDGKHIISVSEDSNVCIWNYTGHDRSTSKAKKIWSSESFLSHNSVIAVPWCGIESIPGTLLSPSLGEDANQRCSLPSPDCFFLSRGFLSELIPKVSATWPEETLVDSNQTQTVVSPTMCKSEYKFLKSACKGMSNSHLWGQVIVTAGWDGYIRVYQNYGLPVRG* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04529 719 PRINTS G protein beta WD-40 repeat signature 283 297 IPR020472 -
Phac2g04529 719 PRINTS G protein beta WD-40 repeat signature 386 400 IPR020472 -
Phac2g04529 719 PRINTS G protein beta WD-40 repeat signature 428 442 IPR020472 -
Phac2g04529 719 ProSiteProfiles Trp-Asp (WD) repeats profile. 264 305 IPR001680 GO:0005515
Phac2g04529 719 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 264 297 - -
Phac2g04529 719 ProSiteProfiles Trp-Asp (WD) repeats profile. 368 408 IPR001680 GO:0005515
Phac2g04529 719 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 368 400 - -
Phac2g04529 719 Gene3D - 493 606 IPR015943 GO:0005515
Phac2g04529 719 FunFam WD repeat-containing protein 44 isoform A 251 495 - -
Phac2g04529 719 ProSiteProfiles Trp-Asp (WD) repeats profile. 408 442 IPR001680 GO:0005515
Phac2g04529 719 MobiDBLite consensus disorder prediction 1 33 - -
Phac2g04529 719 PANTHER WD REPEAT DOMAIN 44 4 716 IPR040324 -
Phac2g04529 719 Gene3D - 253 492 IPR015943 GO:0005515
Phac2g04529 719 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 408 442 - -
Phac2g04529 719 Pfam WD domain, G-beta repeat 262 296 IPR001680 GO:0005515
Phac2g04529 719 Pfam WD domain, G-beta repeat 363 398 IPR001680 GO:0005515
Phac2g04529 719 Pfam WD domain, G-beta repeat 404 440 IPR001680 GO:0005515
Phac2g04529 719 SMART WD40_4 361 399 IPR001680 GO:0005515
Phac2g04529 719 SMART WD40_4 671 711 IPR001680 GO:0005515
Phac2g04529 719 SMART WD40_4 402 441 IPR001680 GO:0005515
Phac2g04529 719 SMART WD40_4 534 574 IPR001680 GO:0005515
Phac2g04529 719 SMART WD40_4 489 533 IPR001680 GO:0005515
Phac2g04529 719 SMART WD40_4 443 482 IPR001680 GO:0005515
Phac2g04529 719 SMART WD40_4 257 296 IPR001680 GO:0005515
Phac2g04529 719 SUPERFAMILY WD40 repeat-like 258 710 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04529 Phac-Chr2 43032129 43036934 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04529 370 562 Miscellaneous Gene Families AT5G08390 27.136 1.18e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04529 - - gmx:100788374 1325.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g04529 2 43032129 43036934 Phac2g04529 2 43032129 43036934 ECH