Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04520 ATGGCCATCCTCTCCCAATCCACTGCCAGTTTCTCCCCTTCCTTCGTCTCCACTCGCTCCGATTTCTCTCGCCTCACTCGCTTCCCCTGCCGTGTCACCTTCCGCCGTCGCTTCACCGTTTCCTCATGCTTCAACTCCTCTAAGTCTCCCGGCGCCGGCGGCTTCCTCTCGCCGGACAACGGCGGCGACGTTTCCTACGAGCTGCACCACGACTTATCGGCGGAGCGCCGCCGCAGCGGCTCGCCGGTGTTCGTCACGATGCCGGTGAATTCCGTCAGCCGGGAGGGAGGCCGAGTCTTGAGGCCTAAGGCGATGATGTTTTCGCTCAAGGCGCTCGCCACGGCCGGCGTTGAAGGTGTCGTGGTCGAGATTTGGTGGGGCTTGGTTGAGAAGAACAAACCTAGGGTTTACGATTGGAGAGGGTACGAGGAACTTGTCGCTATGGCATGCAAGTGTGGCCTCAAGGTTCGAGCTGTTCTCTCGTTTCATCAGCATGGTGCAGGACCTGATGATCCCAATTGGATACCGCTTCCTCTATGGGTGCTTGATGAGATACAGAAAGATGTAGAGTTAGCATATTGTGACCGGTTTGGAAGAAGAAATATTGAATACATTTCCCTTGGATGTGATATTCTTCCTGTGCTGTGTGGACGATCTCCTATTCAAGTGTATGCTGATTTTATGAGAGATTTTAGGGACACTTTCAGGTCTTTGCTTGGTGTTATCATTACAGGTGTGCAGATTGGCATGGGTCCTGGTGGTGAACTAAGGTATCCTTCGTCCTCTTTAGAAGAGTCAAATTTGACATGGTCTGGTGAACTTGGAGAATTTCAATGCTATGACAAGTATATGCTTGCTTCTCTGAATGCCTCTGCAAGAAATATTGGAATGCGTGAATGGGGAAATGGAGGTCCATTTGGTACTGGAAGTTTGATGCACAATCCTGAACATACTGATTTTTTCAAAAATGATGGTGGTTCTTGGGACACACCATATGGTAAATTTTTCCTTGAATGGTACTCAGACATGTTGCTGCTGCATGGGGAAAGGATTTGTAGAGAAGCTGAAACTATATTTAGGGGTACAGAAGTCCATATATCAGCAAAATTGGCTGCCATTCACTGGCACTATGTCACACAATCCCATCCATCAGAGTTAACAGCTGGCTATTATAACACTTTTAACCGGGATGGATACTTACCCATTGCCCGCATGTTTAGTAAGTATGGATTCTCGATGTGCTGCTCTTGTTTTGAGATGCAAGATGCAATAATGCAGAAGATCAATCCAGATGGCAGCCCTGAAGGTTTTCTTAGACAGCTTTTGTTGGCTGCTAGACTCTGTGACCTATCACTTGAAGGTCAAAATTTTTCAACTAATTTGGATGATGGTGCATTCACCCAGGTGCTGAAGATGTCAAAGTTTTACTCGAATGGGATAGAGAAGCGACCTTTCTCGTTCAACTTTGTAAGAATGGACAAAAGATTGTTTGAATCCCGAAATTGGGATCGCTTTACTCGTTTTGTAAGACAAATGTCTAATGGAAATATCTTCCGAGCCAGATTATATTCTGTTGGTGACATACGGTTTAAGGCCGCACCAGTGATGGCAGAGGCGAGATTGTTGTACCAACTATATCAGTACTCTTGA 1650 0.4697 MAILSQSTASFSPSFVSTRSDFSRLTRFPCRVTFRRRFTVSSCFNSSKSPGAGGFLSPDNGGDVSYELHHDLSAERRRSGSPVFVTMPVNSVSREGGRVLRPKAMMFSLKALATAGVEGVVVEIWWGLVEKNKPRVYDWRGYEELVAMACKCGLKVRAVLSFHQHGAGPDDPNWIPLPLWVLDEIQKDVELAYCDRFGRRNIEYISLGCDILPVLCGRSPIQVYADFMRDFRDTFRSLLGVIITGVQIGMGPGGELRYPSSSLEESNLTWSGELGEFQCYDKYMLASLNASARNIGMREWGNGGPFGTGSLMHNPEHTDFFKNDGGSWDTPYGKFFLEWYSDMLLLHGERICREAETIFRGTEVHISAKLAAIHWHYVTQSHPSELTAGYYNTFNRDGYLPIARMFSKYGFSMCCSCFEMQDAIMQKINPDGSPEGFLRQLLLAARLCDLSLEGQNFSTNLDDGAFTQVLKMSKFYSNGIEKRPFSFNFVRMDKRLFESRNWDRFTRFVRQMSNGNIFRARLYSVGDIRFKAAPVMAEARLLYQLYQYS* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04520 549 Gene3D Glycosidases 72 533 - -
Phac2g04520 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 159 180 IPR001554 GO:0000272|GO:0016161
Phac2g04520 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 364 380 IPR001554 GO:0000272|GO:0016161
Phac2g04520 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 116 130 IPR001554 GO:0000272|GO:0016161
Phac2g04520 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 328 347 IPR001554 GO:0000272|GO:0016161
Phac2g04520 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 381 392 IPR001554 GO:0000272|GO:0016161
Phac2g04520 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 399 422 IPR001554 GO:0000272|GO:0016161
Phac2g04520 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 251 273 IPR001554 GO:0000272|GO:0016161
Phac2g04520 549 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 137 155 IPR001554 GO:0000272|GO:0016161
Phac2g04520 549 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 69 514 IPR001554 GO:0000272|GO:0016161
Phac2g04520 549 Pfam Glycosyl hydrolase family 14 103 508 IPR001554 GO:0000272|GO:0016161
Phac2g04520 549 SUPERFAMILY (Trans)glycosidases 80 535 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04520 Phac-Chr2 42964036 42967098 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04520 82 542 Glycoside Hydrolase AT4G17090 49.364 3.24e-153 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04520 K01177 - gmx:100805981 973.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g04520 2 42964036 42967098 Phac2g04520 2 42964036 42967098 ECH