Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04410 ATGATGTTGTATGAAGATCCAGTAAAAGATATTCATATTGAAAATCAAACTTTGACAACAAATTCTGGAAAACTTCTGAAGTATGGTTCGCTTATTATTGCAACAGGATGTACAGCATCAAGGTTTCCAGAGAAAATTGGGGGAAACCTTCCCGGTGTTCATTATATCCGGAATGTTGCAGATGCTGATGCACTGATTTTATCATTGGAAAAAGCAAAAAAGGTTGTAGTTGTTGGAGGTGGTTATATAGGAATGGAGGTTGCTGCTGCTGCTGTTGGTTGGAATCTTGATACCACGATCATATTTCCGGAAGATCAACTTTTGCAAAGACTGTTCACTCCTTCTCTTTCCCGGAGATATGAAGAACTCTATCAAAAAAATGGAGTTAAAATCTTAAAGGGTGCCTCCATAAAAAAATTGGAAGCTGGTTCTAATGGACATGTAGCTGGTGTGGAACTTGGAGATGGATCTATTGTGGAAGCAGATACGGTTATTATAGGCATCGGAGCAAAACCTGCTGTGAGCCCCTTTGAGAGTGTGGGCCTAAATACAGATGTTGGTGGTATACAGGTTGATGGTTTGTTCCGGACAAGAATTCCCGGAATCTTTGCTGTTGGTGATGTAGCGGCTTTCCCTTTAAAGATCTATGACCGTATCTCTCGAGTGGAACATGTAGATCATGCCCGTCGCTCTGCACAGCACTGTGTGAAAGCATTACTCAGCGCACAAACTCACACGTATGACTATCTTCCATACTTCTACTCGAGAGTTTTTGAATATGAAGGAAGCCCTAGAAAAGTATGGTGGCAGTTCTTTGGGGACAACGTTGGAGAAACAGTTGAAATTGGAAATTTTGATCCTAAAATAGCTACCTTCTGGATTGAATCTGGTAAGCTGAAAGGAGTTCTTCTTGAAAGTGGGAGCCCTGAGGAATTTCAACTCCTTCCTAAACTCGCCAGAAGTCAACCTGTGATCGATAAAGCCAAACTTCAAAACGCAACTTCAGTGGAGGAGGCTCTAGAGATTGCTCGGGCATCCTTGCAAGGCGAAGCCGCTGTCTAA 1062 0.4228 MMLYEDPVKDIHIENQTLTTNSGKLLKYGSLIIATGCTASRFPEKIGGNLPGVHYIRNVADADALILSLEKAKKVVVVGGGYIGMEVAAAAVGWNLDTTIIFPEDQLLQRLFTPSLSRRYEELYQKNGVKILKGASIKKLEAGSNGHVAGVELGDGSIVEADTVIIGIGAKPAVSPFESVGLNTDVGGIQVDGLFRTRIPGIFAVGDVAAFPLKIYDRISRVEHVDHARRSAQHCVKALLSAQTHTYDYLPYFYSRVFEYEGSPRKVWWQFFGDNVGETVEIGNFDPKIATFWIESGKLKGVLLESGSPEEFQLLPKLARSQPVIDKAKLQNATSVEEALEIARASLQGEAAV* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04410 353 Gene3D - 3 235 IPR036188 -
Phac2g04410 353 SUPERFAMILY FAD/NAD(P)-binding domain 15 239 IPR036188 -
Phac2g04410 353 Gene3D - 252 339 IPR016156 GO:0016491|GO:0050660
Phac2g04410 353 PRINTS Pyridine nucleotide disulphide reductase class-II signature 70 94 - -
Phac2g04410 353 PRINTS Pyridine nucleotide disulphide reductase class-II signature 29 37 - -
Phac2g04410 353 PRINTS Pyridine nucleotide disulphide reductase class-II signature 197 215 - -
Phac2g04410 353 PANTHER APOPTOSIS-INDUCING FACTOR 1 2 338 - -
Phac2g04410 353 SUPERFAMILY FAD/NAD-linked reductases, dimerisation (C-terminal) domain 245 333 IPR016156 GO:0016491|GO:0050660
Phac2g04410 353 Gene3D - 42 169 IPR036188 -
Phac2g04410 353 FunFam Monodehydroascorbate reductase 252 339 - -
Phac2g04410 353 Pfam Pyridine nucleotide-disulphide oxidoreductase 5 232 IPR023753 GO:0016491
Phac2g04410 353 PRINTS FAD-dependent pyridine nucleotide reductase signature 28 46 - -
Phac2g04410 353 PRINTS FAD-dependent pyridine nucleotide reductase signature 161 177 - -
Phac2g04410 353 PRINTS FAD-dependent pyridine nucleotide reductase signature 74 92 - -
Phac2g04410 353 PRINTS FAD-dependent pyridine nucleotide reductase signature 187 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04410 Phac-Chr2 42221175 42226990 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04410 25 251 Acyl Lipid Metabolism Gene Families AT1G48030 27.386 3.23e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04410 K08232 - gmx:100819919 642.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g04410 2 42221175 42226990 Phac2g04410 2 42221175 42226990 ECH