Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04404 ATGGATTTTTTGACATTTGAAGTTTGGCAGGTCATGGATGTGTTGCTGTCATTATGTGTTCTTTTAGTTGCTTTGCCAAACGTGGCTGTAGTGGAGAGCCGCAAAGCTCCGGTTCTGGACTACTTTGAGTATTGTGCTATGAGCTGCAGAGCTTATAGTGCCTCATTGGAAGAATTTGGAGGTGTTGGTGATGGAACAACTTTGAACACCAAAGCCTTTCAGGCAGCCATAGATCATCTGAGTCAGTATGCATCAAGTGGAGGGTCTCAACTTTATGTTCCCCCAGGAAGATGGTTAACTGGCAGCTTCAATCTCACCAGCCATTTCACTTTATTCCTACACAAGGATGCTGTGATTCTCGCCTCTCAGGATGAAAATGACTGGCCAGTAATTGATCCCTTGCCATCTTACGGTAGAGGGAGGGACACCCAAGGTGGAAGGTTTAGCAGCCTAATTTTTGGGACCAACCTCACTGATGTAATCATAACTGGGAACAATGGCACATTGGATGGACAAGGTGATCTGTGGTGGCAAAAATTCCACAAGGGGGAGCTCAAATATACCCGGCCTTACCTGATTGAAATCATGTACTCAGATAATGTTCAGATATCCAATCTCACTTTGGTGAACTCTCCATCGTGGAATGTTCATCCTGTATACAGCAGCAACGTTGTTGTTCAAGGGGTCACAATTCTTGCTCCTGTGACATCTCCAAATACAGATGGAATCAACCCTGACTCTTGCACAAACACAAGAATTGAAGACTGTTATATTGTGTCCGGGGATGACTGTGTGGCTGTGAAGAGTGGTTGGGATGAGTATGGTATAGCTTATGGAATGCCAACAAAGCAGCTTGTAATCAGAAGACTCACTTGTATTTCTCCATTCAGTGCTGTGATTGCTTTAGGGAGTGAGATGTCTGGTGGGATCCAAGATGTGAGAGCTGAGGACATTGTAGCCATCAATACAGAATCAGGGGTTAGAATCAAAACTGCTGTAGGAAGAGGAGGATATGTTAAGGACATATATGTCAGAAGAATGACAATGAAAACCATGAAATGGGCATTTTGGATGACAGGAAATTACGGGTCCCATGCTGATGACAAGTATGATCCTAATGCACTTCCTGTGATTCAGAACATAAACTATCGTGATATGGTTGCTGAGAATGTCACTATGGCTGCGAGGTTGGAGGGTATCTCTGGTGACCCTTTTACTGGAATCTGCATATCTAATGTAACCATTCAACTGGCAAAGAAGGCTAAAAAAGTTCCATGGACTTGCACTGATATTGATGGGATTTCAAGCGATGTCACTCCTGCACCATGTAATCTGTTGCCAGAACAAGGAGAAGATAATATTGGAGCATGTACCTTCCCAGAAGAAAGTTTGCCAATTGAAGATGTCCAGGTTCAAACGTGCACTTACAGTAGGAATTTATGA 1443 0.4352 MDFLTFEVWQVMDVLLSLCVLLVALPNVAVVESRKAPVLDYFEYCAMSCRAYSASLEEFGGVGDGTTLNTKAFQAAIDHLSQYASSGGSQLYVPPGRWLTGSFNLTSHFTLFLHKDAVILASQDENDWPVIDPLPSYGRGRDTQGGRFSSLIFGTNLTDVIITGNNGTLDGQGDLWWQKFHKGELKYTRPYLIEIMYSDNVQISNLTLVNSPSWNVHPVYSSNVVVQGVTILAPVTSPNTDGINPDSCTNTRIEDCYIVSGDDCVAVKSGWDEYGIAYGMPTKQLVIRRLTCISPFSAVIALGSEMSGGIQDVRAEDIVAINTESGVRIKTAVGRGGYVKDIYVRRMTMKTMKWAFWMTGNYGSHADDKYDPNALPVIQNINYRDMVAENVTMAARLEGISGDPFTGICISNVTIQLAKKAKKVPWTCTDIDGISSDVTPAPCNLLPEQGEDNIGACTFPEESLPIEDVQVQTCTYSRNL* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04404 480 PANTHER PECTIN LYASE-RELATED 22 468 - -
Phac2g04404 480 Gene3D - 44 438 IPR012334 -
Phac2g04404 480 SUPERFAMILY Pectin lyase-like 46 447 IPR011050 -
Phac2g04404 480 FunFam Glycoside hydrolase family 28 protein 40 437 - -
Phac2g04404 480 Pfam Glycosyl hydrolases family 28 147 423 IPR000743 GO:0004650|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04404 Phac-Chr2 42169368 42171218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04404 6 476 Glycoside Hydrolase AT3G61490 68.058 0.0 719
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04404 - - gmx:100785841 915.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g04404 2 42169368 42171218 Phac2g04404 2 42169368 42171218 ECH