Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04393 ATGGGATACGGTGAAAAGGGAGGAAGACCTCCGTTCAAAAAGTTCAAGGCCTTTTCAAAATTCGAAGATCCTCGAAAAGGATTTGCCGAAGATGACGATGTATATGGCAGCGATGATGCATACGACGACGACGAAGGGAAAACCAAGGATTTTAGCAAATTAGAGCTGAAACAGGATCACACCAATCGCCCTCTGTGGGCTTGTGGCAATGGCCGCATATTTCTCGAGACTTTCTCGCCTTTGTACAAGCAAGCTTATGATTTTCTCATCGCCATCGCTGAGCCTGTTTGCAGGCCGGAGTCTATGCACGAGTACAACCTTACTCCACACTCGCTGTATGCTGCTGTTTCAGTTGGTCTGGAAACTGAAACAGTTATAAGTGTTTTGAACAAGCTATCCAAAACCAAGCTTCCCAAAGAGATGATTAAATTTATACATGATTCTACTGCAAATTATGGCAAGGTGAAACTTGTGCTCAAGAAGAATCGCTACTTTGTTGAATCTCCATTTCCAGAGGTATTGAAGACATTGCTCAGGGACGATACTATATCTCGAGCAAGGATTATTTCCGAGAATGTAAATGGAGATGGATTTACAATCAGCAAAGCAGCAGGTGAAATTGAAGGCACTCATGATGAATTGCTAAATGAAGCAGAAGTGGCAGCGGTTGCAGAAGAGAAAGAAACACATTCATTTGAAGTTGATCCTTCTCAGGTCGAAAATGTAAAGCAACGGTGCTTGCCAAATGCATTAAATTATCCCATGTTGGAGGAGTATGACTTCAGAAATGATACAGTGAACCCAGACCTTGACATGGAACTAAAGCCTCAAGCACAACCAAGGCCATATCAAGAGAAGAGTCTTAGTAAAATGTTTGGAAATGGCAGAGCAAGGTCTGGTATAATAGTTCTACCTTGTGGTGCTGGAAAGTCCCTAGTTGGTGTTTCTGCAGCTTGCCGGATAAAAAAAAGCTGCCTTTGTTTGGCAACAAATGCTGTTTCTGTAGATCAGTGGGCTTTTCAATTTAAACTTTGGTCAACTATCCGAGAAGAACAAATATGTCGATTCACGTCTGATAGCAAAGAGAGATTCCGCGGTAATGCTGGAGTTGTTGTGACGACATATAATATGGTTGCTTTTGGTGGTAAACGGTCTGAAGAATCTGAAAAGATCATTGAAGAAATAAGAAACAGAGAATGGGGATTGCTCCTCATGGATGAGGTGCATGTGGTTCCGGCTCATATGTTTCGTAAAGTCATTAGTATCACTAAATCTCACTGTAAACTTGGGCTCACAGCTACACTTGTCAGAGAGGACGAAAGGATTACAGATCTGAACTTCCTGATTGGTCCCAAGCTGTACGAGGCAAATTGGTTGGATCTAGTAAAAGGTGGATTCATTGCAAATGTACAGTGTGCTGAAGCACTTTATGTGATGAATCCTAATAAGTTCCGAGCGTGCGAGTTTCTCATAAATTACCATGAAAGGGCACGTGGTGATAAAATTATAGTCTTTGCTGATAATCTGTTTGCTCTCACTGAGTATGCCATGAAACTCCGCAAACCAATGATATATGGTGCTACAAGCCATGTAGAGAGGACAAAAATTTTACAAGCATTCAAAACTAGCAAGGATGTAAATACCATATTTCTTTCGAAGGTGGGTGACAACTCAATCGATATTCCTGAAGCAAATGTGATAATTCAAATCTCTTCACATGCTGGTTCAAGGAGACAAGAAGCCCAGCGTCTGGGTCGTATTCTTAGGGCGAAGGGAAAGCTCCAGGATAGGATGGCTGGGGGTAAGGAGGAGTATAATGCCTTCTTTTATTCCCTTGTCTCAACTGATACCCAGGAGATGTATTATTCAACTAAGAGGCAACAATTTTTAATTGATCAGGGTTACAGCTTTAAGGTAATTACAAGCTTGCCTCCTTCTGATGAAGGACCTAGTTTGAACTATTATCATCTTGAGGATCAATTGGCGCTTCTTGGAAAGGTTTTGAGTGCTGGTGATGATGCAGTTGGATTAGAACAACTGGAGGAAGATGCAGATGAAATAGCTCTTCACAATGCTCGTCGTTCTCATGGATCCATGAGTGCAATGTCAGGTGCAAAAGGGATGGTTTATATGGAATACAGCACTGGGCGCAAAGGCCAAGGACAGATCAAGAGCAAGCCAAAAGATCCAGCGAAGAGACACTTCTTATTTAAAAGAAGATATGGCGCAACCTAA 2235 0.4197 MGYGEKGGRPPFKKFKAFSKFEDPRKGFAEDDDVYGSDDAYDDDEGKTKDFSKLELKQDHTNRPLWACGNGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETVISVLNKLSKTKLPKEMIKFIHDSTANYGKVKLVLKKNRYFVESPFPEVLKTLLRDDTISRARIISENVNGDGFTISKAAGEIEGTHDELLNEAEVAAVAEEKETHSFEVDPSQVENVKQRCLPNALNYPMLEEYDFRNDTVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIREEQICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISITKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEALYVMNPNKFRACEFLINYHERARGDKIIVFADNLFALTEYAMKLRKPMIYGATSHVERTKILQAFKTSKDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPSDEGPSLNYYHLEDQLALLGKVLSAGDDAVGLEQLEEDADEIALHNARRSHGSMSAMSGAKGMVYMEYSTGRKGQGQIKSKPKDPAKRHFLFKRRYGAT* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04393 744 NCBIfam DNA repair helicase rad25 50 739 IPR001161 GO:0003678|GO:0006289|GO:0006367
Phac2g04393 744 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 485 651 IPR001650 -
Phac2g04393 744 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 389 689 IPR027417 -
Phac2g04393 744 Gene3D - 462 679 IPR027417 -
Phac2g04393 744 SMART helicmild6 513 591 IPR001650 -
Phac2g04393 744 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 238 455 IPR027417 -
Phac2g04393 744 CDD DEXHc_XPB 272 441 - -
Phac2g04393 744 FunFam Probable DNA repair helicase RAD25 270 461 - -
Phac2g04393 744 PRINTS Xeroderma pigmentosum group B protein signature 63 83 - -
Phac2g04393 744 PRINTS Xeroderma pigmentosum group B protein signature 149 168 - -
Phac2g04393 744 PRINTS Xeroderma pigmentosum group B protein signature 292 314 - -
Phac2g04393 744 PRINTS Xeroderma pigmentosum group B protein signature 547 565 - -
Phac2g04393 744 PRINTS Xeroderma pigmentosum group B protein signature 261 287 - -
Phac2g04393 744 PRINTS Xeroderma pigmentosum group B protein signature 694 713 - -
Phac2g04393 744 PRINTS Xeroderma pigmentosum group B protein signature 500 522 - -
Phac2g04393 744 PRINTS Xeroderma pigmentosum group B protein signature 566 591 - -
Phac2g04393 744 PRINTS Xeroderma pigmentosum group B protein signature 603 626 - -
Phac2g04393 744 Pfam Type III restriction enzyme, res subunit 279 435 IPR006935 GO:0003677|GO:0005524|GO:0016787
Phac2g04393 744 FunFam Putative DNA repair helicase rad25 473 681 - -
Phac2g04393 744 CDD SF2_C_XPB 475 613 - -
Phac2g04393 744 Pfam ERCC3/RAD25/XPB C-terminal helicase 472 686 IPR032438 -
Phac2g04393 744 SMART ultradead3 276 457 IPR014001 -
Phac2g04393 744 Gene3D - 270 461 IPR027417 -
Phac2g04393 744 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 291 453 IPR014001 -
Phac2g04393 744 Pfam Helicase conserved C-terminal domain 65 188 IPR032830 -
Phac2g04393 744 PANTHER RAD25/XP-B DNA REPAIR HELICASE 54 713 - -
Phac2g04393 744 MobiDBLite consensus disorder prediction 26 46 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04393 K10843 - gmx:100789550 1373.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g04393 2 42048736 42056326 Phac2g04393 2 42048736 42056326 ECH