Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04371 ATGGCGTTATCATTTCTCCGTGTTCCACGCTTGCTTTCTCCAACTCCTACACCTGCAACTGCAACTGCAACATCCACTGTAGTAAAGTTCCAACACTTTCGCAAACCTTGTAACTTCACACCCTTCTTTCGCTCCACAATTTTATGTCCCTTGGTTCGGGCCATTGGGCGTGATGGAAGGTTCTACCCAACCCCAGCCGACGACGACCCACCGGAGGCTGCCGAGGACTCCTCCCATGGCTTCTCCACCTTCCAACAAATCCATCACCAAGCGGAACGCGCGCGCCAAATCGAAGAGGAAGACTACAAGAACAACCAGGCCACGTACCTCGCCGCCATCGCCGACGTCGAAGATGCCCCCGAAAACGTAGACTTCGACACCTCTGGCGACGACCTCTTCGGCGATATCGACAAAGCTATCGCGCTCAAGCGAAAGGAGTTCGTCTCCCAAGGCCTTCTTGAGCCGAATCCCCCCAAACAAGACCAGCTTGCCGCCGCAGCCGTGGATGAACTTCAGTCGGAGGAGCTCGGCGATTTGGAGGAAATTGAACGGCTCCAGGGACTCACCGGTAACGGTTATGGTAATGGAGGTTTGAGTGAATCTCCGTTTGAATTGGATTTTGACAGTTACGGGAAAAGTAAGGTTAGGATTGTAGACGGAAAGTTTAAGATGAGTTTGGCTGAGCTTCTAGACGAGAGTAAGGTCGTGCCGGTGTCGGTTTCCGGTGATTTGGAAGTCGAAATCACCGGAATTCAGCACGATTCGCGGATTGTTAATTCCGGTGATTTGTTTGTGTGTTGTGTTGGGCGAAAAACCGATGGACATTTGTTTCTTTCTGAGGCTGATAAGAGAGGTGCTATTGCGGTTGTGGCTAGTAAAGAGGTTGATATTGAGGATACTTTGGGGTGTAAGGCTTTGGTTATTGTGGAAGATACTAATGCTGTCCTTCCTGCTTTGGCTGCGTCGTTTTATAAACATCCTTCAACTAAAATGGCTGTGATTGGGATAACTGGGACTTATGGCAAAACGACCACCACTTGTTTGATTAAAAGTTTGTATGAATCCATGGGAATGCGCACTGGGATGTTGAACTCGGTTGCCTCTTTTGTCCACGGGGATAATAAGTTGGAGTTGGGTAGCGCGGCGTTGGATGCTGTTTTGGTTCAGAATTTGATGGCGAAGATGATTCACAATGGGACTGAGGCGGTGGTCATGGAGGCTGGTTCTCATGGGCTGGGGAAGGGGAAGTATGATGAGGTTGATTTTGATATCGCTGTTTTCACTAATTTGAGTCGGGAGAAGGACGGCGACAGAGATGCGCAGGCTAAGTTGTTCTCGAGAATGGTGGATCCTGAGAGGCATAGGAAGGTTGTTAACATTGATGATCCGAATGCCCCCTTTTTTTTGTCGCAGGGGAACCAGGAGGTTCCTGTTGTGACGTTTGCGATGGAGAATAAGGATGCAGATGTTCATCCTTTGAAGTTTGAACTTTCTTTATTTGAGACACAGGTGTTGGTTAATACTCCCACAGGGATACTGGAGATTTCTTCAGGTTTGCTTGGGAAGCATAATATTTACAACATTCTTGCGGCTGTAGCGGTTGGGATTGCTGTTGGGGCGCCCTTAGAGGACATTGTTAGAGGGATTGAAGAGGTTGATGCGGTTCCTGGGAGGTGTCAGTTGATTGATGAGGAACAGGCGTTTGGGGTGATAGTGGACCATGCCAGTACTCCTGATGCGTTGTCTAGATTGCTTGATTCTGTAAGAGAGCTAGGACCTCGCAGGATCATAACTGTCATTGGATGCTGTGGTGAGGGCGACAGGGGTAAGAGACCTGCGATGACCAAGATAGCAACTGATAAAAGTGAAGTGACCATGCTGACATCTGACAATCCCAAAAATGAAGACCCATTGGATATATTGGATGATATGTTATCTGGGGTAGGATGGTCAATGCATGACTACCTCAAATATGGAGAAAATGACTATTATCCACCTCTTCCAAATGGTCATAGACTTTTTCTCCATGACATCAGGAGAGTAGCTGTGCGAGCCGCGGTTGCAATGGGAGAGGAGGGCGATGTGGTTGTGGTTACTGGCAAAGGCCATGAAGCATATCAAATAGAAGGTGATAAGAAGGAGTTCTTTGACGATCGAGAAGAGTGCCGAGAGGCATTGCAGTATGTTGATGAGCTTCACCAAGCTGGAATAGATACAAGTGAATTTCCATGGAGGTTACCAGAAAGCCATTGA 2253 0.4816 MALSFLRVPRLLSPTPTPATATATSTVVKFQHFRKPCNFTPFFRSTILCPLVRAIGRDGRFYPTPADDDPPEAAEDSSHGFSTFQQIHHQAERARQIEEEDYKNNQATYLAAIADVEDAPENVDFDTSGDDLFGDIDKAIALKRKEFVSQGLLEPNPPKQDQLAAAAVDELQSEELGDLEEIERLQGLTGNGYGNGGLSESPFELDFDSYGKSKVRIVDGKFKMSLAELLDESKVVPVSVSGDLEVEITGIQHDSRIVNSGDLFVCCVGRKTDGHLFLSEADKRGAIAVVASKEVDIEDTLGCKALVIVEDTNAVLPALAASFYKHPSTKMAVIGITGTYGKTTTTCLIKSLYESMGMRTGMLNSVASFVHGDNKLELGSAALDAVLVQNLMAKMIHNGTEAVVMEAGSHGLGKGKYDEVDFDIAVFTNLSREKDGDRDAQAKLFSRMVDPERHRKVVNIDDPNAPFFLSQGNQEVPVVTFAMENKDADVHPLKFELSLFETQVLVNTPTGILEISSGLLGKHNIYNILAAVAVGIAVGAPLEDIVRGIEEVDAVPGRCQLIDEEQAFGVIVDHASTPDALSRLLDSVRELGPRRIITVIGCCGEGDRGKRPAMTKIATDKSEVTMLTSDNPKNEDPLDILDDMLSGVGWSMHDYLKYGENDYYPPLPNGHRLFLHDIRRVAVRAAVAMGEEGDVVVVTGKGHEAYQIEGDKKEFFDDREECREALQYVDELHQAGIDTSEFPWRLPESH* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04371 750 Pfam Mur ligase family, glutamate ligase domain 555 638 IPR004101 GO:0009058|GO:0016881
Phac2g04371 750 MobiDBLite consensus disorder prediction 62 84 - -
Phac2g04371 750 FunFam UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase 560 733 - -
Phac2g04371 750 SUPERFAMILY MurE/MurF N-terminal domain 224 327 IPR035911 -
Phac2g04371 750 Hamap UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 224 726 IPR005761 GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301
Phac2g04371 750 Gene3D - 327 558 IPR036565 GO:0005524|GO:0009058
Phac2g04371 750 PANTHER MUR LIGASE FAMILY MEMBER 179 736 - -
Phac2g04371 750 NCBIfam UDP-N-acetylmuramyl-tripeptide synthetase 246 727 IPR005761 GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301
Phac2g04371 750 SUPERFAMILY MurD-like peptide ligases, catalytic domain 307 566 IPR036565 GO:0005524|GO:0009058
Phac2g04371 750 SUPERFAMILY MurD-like peptide ligases, peptide-binding domain 555 727 IPR036615 GO:0009058|GO:0016881
Phac2g04371 750 Gene3D - 560 737 IPR036615 GO:0009058|GO:0016881
Phac2g04371 750 Pfam Mur ligase middle domain 336 534 IPR013221 GO:0005524|GO:0009058|GO:0016881
Phac2g04371 750 Pfam Mur ligase family, catalytic domain 247 324 IPR000713 GO:0009058|GO:0016881
Phac2g04371 750 Gene3D - 225 325 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04371 - - gmx:100776096 1260.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g04371 2 41905840 41910207 Phac2g04371 2 41905840 41910207 ECH