Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04354 ATGAGAGAAATCCTCCATGTTCAAGCAGGTCAATGTGGCAACCAAATTGGAGGCAAGTTTTGGGAGGTGATGTGTGATGAGCATGGGATAGATGCCTCTGGAAATTACGTAGGGGACTCTCATCTTCAACTTGAGAGGGTTAACGTCTACTACAATGAAGCAAGTGGAGGACGCTATGTTCCTCGAGCTGTGCTTATGGACCTTGAACCGGGGACCATGGACAGCTTGCGATCTGGTCCTTATGGGAAAATTTTCAGGCCTGATAACTTTGTGTTTGGTCAAAATGGAGCTGGAAACAACTGGGCCAAGGGGCATTACACCGAGGGAGCAGAGCTTATTGATTCTGTTCTTGATGTTGTTCGTAAAGAAGCTGAGAACTGTGACTGCTTGCAGGGGTTTCAAATTTGTCACTCACTGGGAGGTGGAACTGGGTCTGGAATGGGTACCTTGCTTATCTCAAAGATCAGAGAAGAGTATCCAGATAGGATGATGTTGACATTCTCAGTGTTCCCATCTCCTAAGGTCTCTGATACAGTAGTTGAACCCTACAATGCCACTCTCTCTGTTCACCAACTGGTGGAGAATGCAGATGAATGCATGGAGATGTTCCGGCGCGTCTCCGATCAGTTCACCGTCATGTTCAAGAAAAAGGCCTTCTTGCATTGGTACACCGCGGAGGGCATGGATGAGATGGAGTTCACTGAGGCTGAGAGCAACATGAACGACTTGGTGGCTGAGTACCAGCAGTATCAAGATGCCGCCGCCATGGAAGAGGGAGAGATTGATGAGGATGAAGAGGATGACCTGGTTGCATGA 816 0.4816 MREILHVQAGQCGNQIGGKFWEVMCDEHGIDASGNYVGDSHLQLERVNVYYNEASGGRYVPRAVLMDLEPGTMDSLRSGPYGKIFRPDNFVFGQNGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGFQICHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLVENADECMEMFRRVSDQFTVMFKKKAFLHWYTAEGMDEMEFTEAESNMNDLVAEYQQYQDAAAMEEGEIDEDEEDDLVA* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04354 271 Pfam Tubulin/FtsZ family, GTPase domain 3 199 IPR003008 GO:0005525
Phac2g04354 271 Coils Coil 233 267 - -
Phac2g04354 271 ProSitePatterns Tubulin subunits alpha, beta, and gamma signature. 140 146 IPR017975 GO:0005525|GO:0005874|GO:0007017
Phac2g04354 271 PRINTS Beta-tubulin signature 41 58 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Phac2g04354 271 PRINTS Beta-tubulin signature 152 164 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Phac2g04354 271 PRINTS Beta-tubulin signature 108 126 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Phac2g04354 271 PRINTS Beta-tubulin signature 88 99 IPR002453 GO:0003924|GO:0005200|GO:0005525|GO:0005874|GO:0007017
Phac2g04354 271 SMART Tubulin_4 47 259 IPR003008 GO:0005525
Phac2g04354 271 Gene3D Tubulin/FtsZ, GTPase domain 1 248 IPR036525 -
Phac2g04354 271 PRINTS Tubulin signature 10 30 IPR000217 GO:0005874|GO:0007017
Phac2g04354 271 PRINTS Tubulin signature 93 104 IPR000217 GO:0005874|GO:0007017
Phac2g04354 271 PRINTS Tubulin signature 151 172 IPR000217 GO:0005874|GO:0007017
Phac2g04354 271 PRINTS Tubulin signature 51 70 IPR000217 GO:0005874|GO:0007017
Phac2g04354 271 PRINTS Tubulin signature 176 189 IPR000217 GO:0005874|GO:0007017
Phac2g04354 271 PRINTS Tubulin signature 106 130 IPR000217 GO:0005874|GO:0007017
Phac2g04354 271 PRINTS Tubulin signature 132 150 IPR000217 GO:0005874|GO:0007017
Phac2g04354 271 PRINTS Tubulin signature 190 210 IPR000217 GO:0005874|GO:0007017
Phac2g04354 271 SUPERFAMILY Tubulin nucleotide-binding domain-like 1 200 IPR036525 -
Phac2g04354 271 FunFam Tubulin beta chain 1 218 - -
Phac2g04354 271 SUPERFAMILY Tubulin C-terminal domain-like 182 251 IPR008280 -
Phac2g04354 271 CDD beta_tubulin 2 251 - -
Phac2g04354 271 PANTHER TUBULIN 201 251 IPR000217 GO:0005874|GO:0007017
Phac2g04354 271 FunFam Tubulin beta chain 199 270 - -
Phac2g04354 271 ProSitePatterns Tubulin-beta mRNA autoregulation signal. 1 4 IPR013838 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04354 Phac-Chr2 41810661 41813204 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04354 K07375 - csem:103393554 439.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g04354 2 41810661 41813204 Phac2g04354 2 41810661 41813204 ECH