Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04291 ATGGATGCAATTAACAACATACTCAACCTTGCATTGCCTCCACTTTCCCTAATATTCCTCTCCATTTTAGTGCTACCTTCGCTCATATTCAAGCAGCTTGTTCATGTAAGAAAATCACTAAGCAAGGAAAACGTTGCAAGCAAAGTTGTATTAATCACCGGAGCAGCCTCAGGAATTGGCGAGGAAATAGCGTATGATTATGCAAGGCGAGGAGCAAAGCTTTCCCTGGTTGACATAAGAAAGGAGAAACTTGAGGCAGTGAGTGATAAGGCACGATCTCTGGGTTGTCCTGATGTTACCATCATTGGTGCTGATGTATCCAAGATTCAAGACTGCAAACGCTTGGTTGATGAAACTATCAACTACTTTGGAAGACTGGATCATTTGGTAAATAATGCGGGAATCAGCGGTAAGTCTACGAGGGTGGAGAATTTGTGTCATGTTTCCGACTGTGCTGCAGTTATGGATGTAAATTTTTGGGGAGCAGTTAATGCTACATTATATGCCATCCCACATCTGAAAATTAATAAAGGAAGGATTACAGTGATTGCTTCAGTTTCCGGATGGTTTCCAATGCCACTGATAAGTATTTATAATGCTAGCAAAGCAGCCATAATAAGCTTCTTTGAGACTCTGAGAATGGAAGTTGGTTCTACTATCGGCATAACAATTGCCACGCCGGGTCTTATCAATACAGACCTTATGAGGGCCGTGAAATTGGACAAGGTTGCTATGGGAAGAGTTCCAATGGGGTCAGCTAGTGAGTGTGCTAAAGGCATAGTTGAAAGTGCATGCAGGGGAGATATGTATGTTACATATCCATCCTGGTACAAAGTGTTGTTTCCTTGGAAGCTGCTTCATCCTCAATTCGTAGATTGGGCCTGCAACTTAGCCTCTGGGCCTTATCCCAAGAAATCTGCCATGAAAACCACTCTCATGATGCCAGAGCATAAGGCAGAATAA 963 0.4278 MDAINNILNLALPPLSLIFLSILVLPSLIFKQLVHVRKSLSKENVASKVVLITGAASGIGEEIAYDYARRGAKLSLVDIRKEKLEAVSDKARSLGCPDVTIIGADVSKIQDCKRLVDETINYFGRLDHLVNNAGISGKSTRVENLCHVSDCAAVMDVNFWGAVNATLYAIPHLKINKGRITVIASVSGWFPMPLISIYNASKAAIISFFETLRMEVGSTIGITIATPGLINTDLMRAVKLDKVAMGRVPMGSASECAKGIVESACRGDMYVTYPSWYKVLFPWKLLHPQFVDWACNLASGPYPKKSAMKTTLMMPEHKAE* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04291 320 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 198 217 IPR002347 -
Phac2g04291 320 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 124 135 IPR002347 -
Phac2g04291 320 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 178 186 IPR002347 -
Phac2g04291 320 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 185 213 IPR020904 GO:0016491
Phac2g04291 320 Gene3D - 30 300 - -
Phac2g04291 320 PRINTS Glucose/ribitol dehydrogenase family signature 218 235 IPR002347 -
Phac2g04291 320 PRINTS Glucose/ribitol dehydrogenase family signature 124 135 IPR002347 -
Phac2g04291 320 PRINTS Glucose/ribitol dehydrogenase family signature 198 217 IPR002347 -
Phac2g04291 320 PRINTS Glucose/ribitol dehydrogenase family signature 49 66 IPR002347 -
Phac2g04291 320 PRINTS Glucose/ribitol dehydrogenase family signature 172 188 IPR002347 -
Phac2g04291 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 44 295 IPR036291 -
Phac2g04291 320 Pfam short chain dehydrogenase 48 239 IPR002347 -
Phac2g04291 320 PANTHER RETINOL DEHYDROGENASE-RELATED 46 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04291 Phac-Chr2 41370061 41373201 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04291 43 262 Acyl Lipid Metabolism Gene Families AT1G24360 31.278 6.79e-18 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04291 K22418 - gmx:100808990 402.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g04291 2 41370061 41373201 Phac2g04291 2 41370061 41373201 ECH