Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04233 ATGGAAGCAATGAACACGAGGGTTAGAGAAGAAGTGAGAGTAGAAGATGATAGCACTCGCACTGAACTCACCAAAATTCGTCTCCTTAGGACAATTCTTGAAACACAGGATCCCTCTTCTAAGGAAGAAGATGATTTTACGATTAGAAGATTCCTACGTGCTCGTGATTTAGATTTGGAGAAGGCTTCTACAATGTTCCTCAAGTACTTGAAATGGAAACATTCATTTGTTCCAAATGGTGTATCTGTATCAGATGTTCCCAATGAAGTTGCTCAAGACAAGGCGTTCTTACAAGGACACGACAAGATTGGTCGACCTATACTTGTTGTCTTCGGTAAAAAACATTTTCAGAACAAACATGGTGGTCTAGATGAATTCAAACGGTTTGTGGTCTTTGTCTTTGACAAAATTTGTGCAAGTATGCCACCTGGTCAAGAAAAGTTTGTTGGTATAGCAGAACTCCAGGGATGGGGATACTCAAACAGTGACATTCGTGGATACCTTAGTGCACTAGCAATTTTGCAGGATTACTACCCAGAAAGATTGGGGAAGTTGTTTATTGTGAATGCACCATACATATTTATGAAAGTGTGGAAAATTGTTTACCCTTTCATTGACAACAAAACCAAGAAGAAGATAGTGTTTGTGGATAAAAATAAGGTGAAGTCAGCACTGCTAGAAGACATTGATGAAAGTAATATACCAGAGATATTTGGTGGGCCAGTGCCATTAGTCCCAATTCAGGATATCTAA 753 0.3904 MEAMNTRVREEVRVEDDSTRTELTKIRLLRTILETQDPSSKEEDDFTIRRFLRARDLDLEKASTMFLKYLKWKHSFVPNGVSVSDVPNEVAQDKAFLQGHDKIGRPILVVFGKKHFQNKHGGLDEFKRFVVFVFDKICASMPPGQEKFVGIAELQGWGYSNSDIRGYLSALAILQDYYPERLGKLFIVNAPYIFMKVWKIVYPFIDNKTKKKIVFVDKNKVKSALLEDIDESNIPEIFGGPVPLVPIQDI* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04233 250 PANTHER OS03G0850700 PROTEIN 15 249 - -
Phac2g04233 250 CDD SEC14 96 240 IPR001251 -
Phac2g04233 250 Gene3D - 15 246 IPR036865 -
Phac2g04233 250 SUPERFAMILY CRAL/TRIO domain 86 243 IPR036865 -
Phac2g04233 250 SUPERFAMILY CRAL/TRIO N-terminal domain 16 80 IPR036273 -
Phac2g04233 250 SMART sec14_4 89 243 IPR001251 -
Phac2g04233 250 Pfam CRAL/TRIO domain 94 240 IPR001251 -
Phac2g04233 250 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 97 246 IPR001251 -
Phac2g04233 250 SMART CRAL_TRIO_N_2 44 69 IPR011074 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04233 Phac-Chr2 40954161 40961729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04233 50 236 Acyl Lipid Metabolism Gene Families AT5G47730 27.094 1.76e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04233 - - gmx:548015 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g04233 2 40954161 40961729 Phac2g04233 2 40954161 40961729 ECH