Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04100 ATGGGCTTCTGCATTTTCAGCAATGTGGCCATTGCAGCCCGTCATGCTCAGCGTGTTCATGGACTGAAGCGTGTGCTTATTATTGATTTTGATGTTCATCATGGAAATGGAACAAATGATGCTTTTTATAATGATCCAGATGTATTTTTCCTTTCGTTTCATCAAGATGGAAGCTACCCAGGTACTGGTAAATTTCATGAAGTGGGAAGTGGAGATGGTGAAGGAACCACATTAAATCTGCCGCTTCCTGGGGGCTCAGGCGATACTGCTGTTAGAACCGTGTTCGATGAAGTTATTGTACCATGTGCTCAGAGATTTAAACCAGACATCATTCTTGTTTCTGCTGGGTACGACGGCCACGTCTTGGATCCACTCGCAAATCTTCAATATACAACTGGAACATATTACATGCTAGCGTCCAGTATTAAAGAACTTGCGAGAGATTTATGTGGAGGGCGATGTGTGTTTTTCTTGGAGGGAGGATATAATCTGAAGTCTCTGTCATATTCCGTGGCAGACACATTCCGTGCTCTTCTTGGTGATCGAAGCTTGGCATCTGAGTTTGATGACCCCAACATTTTGTACGAAGAGCCATCTACAAAAGTTAAGCAAGCAATTCAGAGGATAAAACACATTCATTCCCTTTGA 648 0.429 MGFCIFSNVAIAARHAQRVHGLKRVLIIDFDVHHGNGTNDAFYNDPDVFFLSFHQDGSYPGTGKFHEVGSGDGEGTTLNLPLPGGSGDTAVRTVFDEVIVPCAQRFKPDIILVSAGYDGHVLDPLANLQYTTGTYYMLASSIKELARDLCGGRCVFFLEGGYNLKSLSYSVADTFRALLGDRSLASEFDDPNILYEEPSTKVKQAIQRIKHIHSL* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04100 215 Gene3D Histone deacetylase domain 1 214 IPR037138 -
Phac2g04100 215 SUPERFAMILY Arginase/deacetylase 1 182 IPR023696 -
Phac2g04100 215 Pfam Histone deacetylase domain 1 177 IPR023801 -
Phac2g04100 215 CDD HDAC_classII 1 179 - -
Phac2g04100 215 PANTHER HISTONE DEACETYLASE 9-RELATED 1 214 IPR017320 GO:0000118|GO:0004407|GO:0006325|GO:0016575
Phac2g04100 215 PRINTS Histone deacetylase superfamily signature 24 39 IPR000286 -
Phac2g04100 215 PRINTS Histone deacetylase superfamily signature 108 118 IPR000286 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phac2g04100 Phac-Chr2 40219658 40226498 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04100 - - gmx:100788664 424.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g04100 2 40219658 40226498 Phac2g04100 2 40219658 40226498 ECH