Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phac2g04080 ATGAAGGGTGGTACGGTTCAGATTTGCTGGCACGACAGCAAACCCGTCTTAAGCCTCGATTTCCACCCTCTCTCCGCCACTCTCGCCACCGCCGGCGCCGATTTCGACATCAAGTTTTGGTCGATAAATCCCGCTGGGACGCAGAAGCTTCCCGTAGTTTCCTATCTTAGTAACCTCTCTTACCATAGCACTGCAGTGAATGTTATTCGCTTCTCTTCTTCCGGGGAATTGCTGGCCTCTGGTGCTGATGGAGGGGACCTGCTAATATGGAAGCTACATTCTGCCGATACTGGTCAGACATGGAAGTTTCTCAAGATGTTACGATCTCATCTCAAGGACATTTTGGACCTGCAGTGGTCTACCGATGGCACATATATCATATCTGGATCTGTTGATAATAGTTGCATTATATGGGATGTTAACAAAGGAACTAACCTTCAGACGTTGGAGACCCATGCGCACTATGTTCAGGGGGTTGCATGGGACCCTCTAGGAAAATATGTTTCTTCTCTTAGTTCTGATAGGACTTGCAGAATTTACATGAATAAGCCTCATAAATCAAAGGGCACTGAGAAAATCAATTATGTTTGCCAGCAAGTCATTTCTAAGGCAGATCATCCATTATTAAAAAATTCTCAGGATACAAAATTTCACCTCTTTCACGATGAGACATTGCCATCTTTTTTCAGAAGATTAGCATGGTCTCCTGATGGTTCATTTTTAATTGTGCCTTCAGGCTCTTACAAAATTAATAATGCATCCGAGTCTGTGAATGCTGCTTACATAATTTCTAGGAAAGATCTTTCTAGGCCTGCTATACAGCTCCCTTGTGCAAATAAAGCTGTTGTAGCGGTCCGGTTCTGTCCCATAATTTTTAAACTTCAGGGAACGAACTCACTCAACTCAGCCGGGGCATTCAACCTCCCATATCGCATCGTATTTGCTGTGGCCACTTTGAATTCACTGTACATTTATGACACCGAAAGCACATCTCCGTTAGCTGTATTAGCTGGTCTTCACTATGCCGCAATAACAGATATTACCTGGTCATCTGATGCTCATTATTTGGCATTGTCATCACAAGATGGTTTCTGCTCTTTGGTGGAATTTGAGAATGACGAACTTGGATCACCTTACTCTTTATCTGAAGGAAAAGCCAAGGAGGATAGTAAGAGTAATTTACAGACAGGCAATGACACTGTAACGCAAGAGAAGCCTGACAACATGGTCATTGAGGCAACTGGGAATGTTGAAGGGGTTATAGCTGATAGTAGCAAAAATGAAGCAGAAGAGAAAACTGATGACATGATCATTGAAACAAGTGGAAGAATTGGCACTGCTGAATTAGATAGAAGAAAAGCGAAACCAGAAGATAAGGCAACGAAACAGCAATGGAATTCGTGTGCTGTAAATTTAGGAGCTCAAGACAAGGCTGAGAAACAGCCAGCTAATCCAGATTCAGATGGAAAACAAACGGAATCAAGGGAGAAGACAGCTCTGCAATCAAGTTTGGACGGTAAATCGGGTGCAGAAGAAAAGTTTGGGCAACAATTTTCCAGTTCGACGAGTACACCCTTGTCAAATAAGCCAGCCAAGAAGCGTATTACTCCTATTGCCATTGATCCATGA 1629 0.4309 MKGGTVQICWHDSKPVLSLDFHPLSATLATAGADFDIKFWSINPAGTQKLPVVSYLSNLSYHSTAVNVIRFSSSGELLASGADGGDLLIWKLHSADTGQTWKFLKMLRSHLKDILDLQWSTDGTYIISGSVDNSCIIWDVNKGTNLQTLETHAHYVQGVAWDPLGKYVSSLSSDRTCRIYMNKPHKSKGTEKINYVCQQVISKADHPLLKNSQDTKFHLFHDETLPSFFRRLAWSPDGSFLIVPSGSYKINNASESVNAAYIISRKDLSRPAIQLPCANKAVVAVRFCPIIFKLQGTNSLNSAGAFNLPYRIVFAVATLNSLYIYDTESTSPLAVLAGLHYAAITDITWSSDAHYLALSSQDGFCSLVEFENDELGSPYSLSEGKAKEDSKSNLQTGNDTVTQEKPDNMVIEATGNVEGVIADSSKNEAEEKTDDMIIETSGRIGTAELDRRKAKPEDKATKQQWNSCAVNLGAQDKAEKQPANPDSDGKQTESREKTALQSSLDGKSGAEEKFGQQFSSSTSTPLSNKPAKKRITPIAIDP* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phac2g04080 542 MobiDBLite consensus disorder prediction 445 460 - -
Phac2g04080 542 MobiDBLite consensus disorder prediction 513 530 - -
Phac2g04080 542 Pfam WD domain, G-beta repeat 59 91 IPR001680 GO:0005515
Phac2g04080 542 Pfam WD domain, G-beta repeat 143 180 IPR001680 GO:0005515
Phac2g04080 542 Pfam WD domain, G-beta repeat 102 139 IPR001680 GO:0005515
Phac2g04080 542 Pfam WD domain, G-beta repeat 11 41 IPR001680 GO:0005515
Phac2g04080 542 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 59 94 - -
Phac2g04080 542 PRINTS Beta G protein (transducin) signature 107 123 IPR001632 -
Phac2g04080 542 PRINTS Beta G protein (transducin) signature 163 180 IPR001632 -
Phac2g04080 542 PRINTS Beta G protein (transducin) signature 126 140 IPR001632 -
Phac2g04080 542 MobiDBLite consensus disorder prediction 424 438 - -
Phac2g04080 542 ProSiteProfiles Trp-Asp (WD) repeats profile. 59 100 IPR001680 GO:0005515
Phac2g04080 542 Gene3D - 261 508 IPR015943 GO:0005515
Phac2g04080 542 ProSiteProfiles Trp-Asp (WD) repeats profile. 16 43 IPR001680 GO:0005515
Phac2g04080 542 MobiDBLite consensus disorder prediction 393 409 - -
Phac2g04080 542 ProSiteProfiles Trp-Asp (WD) repeats profile. 149 180 IPR001680 GO:0005515
Phac2g04080 542 Gene3D - 4 257 IPR015943 GO:0005515
Phac2g04080 542 PANTHER CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT B 1 542 IPR045145 GO:0006335
Phac2g04080 542 FunFam Chromatin assembly factor 1 subunit FAS2 4 249 - -
Phac2g04080 542 ProSitePatterns Trp-Asp (WD) repeats signature. 126 140 IPR019775 -
Phac2g04080 542 MobiDBLite consensus disorder prediction 378 542 - -
Phac2g04080 542 MobiDBLite consensus disorder prediction 481 495 - -
Phac2g04080 542 SMART WD40_4 329 369 IPR001680 GO:0005515
Phac2g04080 542 SMART WD40_4 2 41 IPR001680 GO:0005515
Phac2g04080 542 SMART WD40_4 52 91 IPR001680 GO:0005515
Phac2g04080 542 SMART WD40_4 100 139 IPR001680 GO:0005515
Phac2g04080 542 SMART WD40_4 142 181 IPR001680 GO:0005515
Phac2g04080 542 ProSiteProfiles Trp-Asp (WD) repeats profile. 107 148 IPR001680 GO:0005515
Phac2g04080 542 SUPERFAMILY WD40 repeat-like 8 367 IPR036322 GO:0005515
Phac2g04080 542 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 107 143 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Phac2g04080 18 197 Miscellaneous Gene Families AT5G08390 24.590 5.51e-11 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Phac2g04080 K10751 - gmx:100784411 815.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phac2g04080 2 40062278 40066753 Phac2g04080 2 40062278 40066753 ECH